| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2399 |
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| Symbol | |
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| ID | 8381553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2566618 |
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| End bp | 2568279 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645005160 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003162335 |
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| Protein GI | 256833608 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000923736 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGAGAT CACTGACTCG GGTAGTTGGC ACCGCCGCCG TCTCCCTCTT CGCTCTCTCC
CTTGTTGCCT GCTCCGACAG CGGCAACAGT GAACCAGAAC CCGTGGACAC CGACGCCCTC
GAAGCAGAAC TTGAGGACAA CATGGTCGGA GCCATGGAGA ACTATGCGGC TGGGCAAACA
TTTGTTGCCA CCGAACCCGT CGAGTTTTCC ATGTTGTACC GCGACCACCC GAACTACCCC
ATCAAAGACG ACTGGTTGCT CTTCACCCAC ATTGAAGACC AGAACAAAGT CAGCTTTGAC
ATCACCTCTG CACCGCTCAG TGACTACGAG CAGCGCCGAT CCCTCCTCAT TGGTGCCGGA
GACGCACCCG ACGTCATCAC CGTCACCTAC CCCGGTCAAG AAGCGCCGTT CGTGGCTTCA
GGCGCGATCC TGCCGATCTC GGACTACGTC CACCTCATGC CGAACTTCCA ACAAAAGCTG
CAAGACTGGG ACCTGGAAGG TGACCTCGAC ACCATCCGCC AAGCTGACGG CAAGTACTAC
ATGCTGCCAG GTATTTACGA GAAGATGCGC TACGACTACT CCATTGGGTT GCGCACAGAC
ATTCTTGAGG ACCTTGGCCT GGAAGAACCC GCCACCTGGG ATGAGTTCCG CACCGTGCTG
GAAGCCATCA AAAAAGAGAA GAACACGAAG TATGTTTTCT CCGACCGGTG GAAAGGTGAA
GCCCTGCTCA ACGTGGCAGC AGCATCCTTC AACACCGTCG CCGGGTGGGG TTTTGGTGGC
GGAACCCTGT ATGACGAAGC GAAAGACGAG TTCTACTTCG CCGGGTCCTC AGATGACTAC
AAAACCATGG TCGAATACTT CGCAGGTCTT GTCCAAGATG GGCTGATGGA CCCCGAGTCC
TTCACCCAAG AAGACGACCA AGCTGACCAG AAACTCGCCA ACGAACAGTC CTTCGCGATC
ACCACGAACG GTCAAGAACT CCTTCGGGAA CGCACCGTGC TGGAAGCCAC CAAGGGCGAC
GACTTCCAAC TCGACAAAAT CCGTGTCCCC TCTGGCCCAG CCGGTGACAA CATGCGTGGG
GCGCGCATCG AAAATGGCTT CATGATTTCC AGCGACGCCA AAGACAACGA CGACTTCGTG
GCAATGCTCC AGTTCCTTGA CTGGTTGTAC TACTCCGATG AAGGACTTGA GTTCGTGCGC
TGGGGGGTCG AAGGGGAAAC CTTCACGAAA GACGCTGACG GTAACCGGGT CCTCGCAGAC
GGCATTGAGT TCTTGGACAC CAACGTGGGG GCCGACAAGC ACTTCCAGGC TGACTACGGT
TTCTTCAACG GTGCGTTCTC ACTTGCCCAC GGGTCCACCG AAGAACTGGT GCTCACACAC
ATCTCCGATG AAGAAAAAGC ATGGGCTGAA GGCATGGCTG ACAAAACCCT CCTGCCCGCC
AACCCGCCCT ACCCACTCGA TGAAGGCGAA CAAGAGCAGG TTGGTTTGTA CCAGACTGCC
CTGACTGACT ACGTCAAGCA AAACACGCTC GCGTTCATCC TTGGTCAACG TGACCTCTCC
GAATGGGATG CGTACGTCTC AGAACTGGAA GGTCAAAACC TGTCCGCCTA CATGGACATC
ATTAATGGTG CGCACAAGCG TTACCAGGAA AACAACGGCT AA
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| Protein sequence | MRRSLTRVVG TAAVSLFALS LVACSDSGNS EPEPVDTDAL EAELEDNMVG AMENYAAGQT
FVATEPVEFS MLYRDHPNYP IKDDWLLFTH IEDQNKVSFD ITSAPLSDYE QRRSLLIGAG
DAPDVITVTY PGQEAPFVAS GAILPISDYV HLMPNFQQKL QDWDLEGDLD TIRQADGKYY
MLPGIYEKMR YDYSIGLRTD ILEDLGLEEP ATWDEFRTVL EAIKKEKNTK YVFSDRWKGE
ALLNVAAASF NTVAGWGFGG GTLYDEAKDE FYFAGSSDDY KTMVEYFAGL VQDGLMDPES
FTQEDDQADQ KLANEQSFAI TTNGQELLRE RTVLEATKGD DFQLDKIRVP SGPAGDNMRG
ARIENGFMIS SDAKDNDDFV AMLQFLDWLY YSDEGLEFVR WGVEGETFTK DADGNRVLAD
GIEFLDTNVG ADKHFQADYG FFNGAFSLAH GSTEELVLTH ISDEEKAWAE GMADKTLLPA
NPPYPLDEGE QEQVGLYQTA LTDYVKQNTL AFILGQRDLS EWDAYVSELE GQNLSAYMDI
INGAHKRYQE NNG
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