| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_2224 |
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| Symbol | |
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| ID | 8381382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2409809 |
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| End bp | 2410969 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645004984 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_003162164 |
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| Protein GI | 256833437 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.492299 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACCTG CTGCCCACAA GGCGTTGTGG GATGACGCCC GCGAGTACGC AACCCGCCAT
CCAGTCGACA GTGCTACACC CGCGTGGGAT ATCCCCACCT GGGTGCGAAC CTCAGGACAG
GTCTTTGGTG ACCAAACCCA ACACGAGACT GCCACCCACC TGCGCAATGA CTTGTATGGT
GCCGGCCCGC TCCAACAATT CCTTGATGAC CCCACCGTGA CAGATGTTCT TGTCCATGGT
GACCGGCTGT GGGTTGACCA AGGACATGGC CCGCAGGAAA TCGCGCAGTC TCCACTGGGC
CAGGGGCAAT CGCGTGAATG GGCGGTACGT CTGGCTGCCC GCGCCGGGAC CCGTCTTGAC
GACGCTCACC CCATCACCGA CGCTCAACTA CCAGATGGGT CCCGGTTCCA CGCTGTCCTT
AGCCCGGTCA GCGACGCTGA TGCCACCATG TCGATCAGAG TGTTCCGCAC CCGCCACGCA
ACACTCCATG ACCTCACCCG CACCGGGATG ATTCCCCGCC AGTGGGCCAG GGCGTGTGCT
CAGGCCGTCA CCCACCGCGC ATCGCTTCTC ATTTCTGGTG GCACAGGGGC GGGGAAAACG
ACCCTTCTCT CCGCGCTGCT GTCCCACGTG CCCCACACAG AACGCATCAT CACCCTGGAA
GACTCCCGTG AGATCGCCAC CAACCATCCC CACGTAGTGG CCCTGCAAGC CAAACCCGCC
AACGTGGAAG GTGCCGGAGC TGTCACCCTG TCCAACCTCG TGCACGCTTC CCTGCGGATG
CGCCCCGATC GGCTCATGCT CGGAGAATGC CGCGGACCAG AAGTGCGCGA TCTGCTCATG
GCCTTTAACA CCGGGCACAG TGGAGGTGCC GCAACCATCC ACGCGAATAG TGTCACCGAT
GTCCCTGCCC GCCTCATAGC ACTAGGTGCG CTCGCCGGCA TGGACCCAGT CACCACGTCT
TTACAGGCAG TGTCTGCTGT GAACGCCATT GTTCACGTAG CCCGTACACC GGCCGGGCAC
CGGTACATCA AGGAGTGGGG TGTGTTAAGG GTGGGGCATG ATTCACTGCT CACCGTCGCC
CCGTTTGCCC GGTGGGATGG TGACACCACC CCTAAAGACG TGCCGCTACC AGCGGGCGTG
GAGCGACCCG CGTGGTGGTG A
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| Protein sequence | MTPAAHKALW DDAREYATRH PVDSATPAWD IPTWVRTSGQ VFGDQTQHET ATHLRNDLYG
AGPLQQFLDD PTVTDVLVHG DRLWVDQGHG PQEIAQSPLG QGQSREWAVR LAARAGTRLD
DAHPITDAQL PDGSRFHAVL SPVSDADATM SIRVFRTRHA TLHDLTRTGM IPRQWARACA
QAVTHRASLL ISGGTGAGKT TLLSALLSHV PHTERIITLE DSREIATNHP HVVALQAKPA
NVEGAGAVTL SNLVHASLRM RPDRLMLGEC RGPEVRDLLM AFNTGHSGGA ATIHANSVTD
VPARLIALGA LAGMDPVTTS LQAVSAVNAI VHVARTPAGH RYIKEWGVLR VGHDSLLTVA
PFARWDGDTT PKDVPLPAGV ERPAWW
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