Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2092 |
Symbol | |
ID | 8381250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2282502 |
End bp | 2284049 |
Gene Length | 1548 bp |
Protein Length | 515 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 645004844 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_003162032 |
Protein GI | 256833305 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGTCAC AGGAAAACAC CCAAGCCCTC TCATCCGACA CGGGGAACGA CCTCCCTGAA CAGCTAAAGG TTCGCCGGGA GAAACGTGCC CGTCTCCTTG ACCAGGGGAA GGAAGCTTAC CCAGTTACTG TGGACCGCAC TCACACAATT GGGCAGATTC GTGCTGGGTA CGCTCACCTG GAACTTGGTG AGGAAACTGA GGACGTCGTT GGTGTCGCTG GGCGAGTTGT CTTTTTGCGT AACACCGGCA AGCTGTGCTT TGTGGCGATC CAGGATGGTG ACGGGCAGCG ACTTCAGGTG ATGTTGTCTC AAGGTGAAGT GGGTGCGCAG TCACTTGCAG ACTTCAAGGC AACTGTTGAT CTGGGTGATC ACTTGTTCGC CAAGGGGCGT GTCATTTCTT CGCGTCGCGG CGAACTGTCC GTGTTTGCTT CACAGTGGTC GCTGGCGGCG AAGTCGTTGC GTCCATTGCC AAACTTGTAT GCCCGCGAAG ATGGGACGAC CGCGGAGTTG TCGGAAGAGG CGCGTGTCCG TCAGCGCTAC GTTGATTTGA TTGCTCGGCC CGCGGCCCGG GACGCGGCAC GGTTGCGGTC ACAAGTTGTA CGGTCATTGC GAGATAACTT CCATGCGCGT GACTTTATGG AAATTGAAAC CCCCATGCTG CAAACAATTC ATGGTGGCGC TGCGGCTCGC CCGTTTGTGA CGCATATGAA TGCGTTTGAT ATGGACTTGT ATCTGCGTAT TGCGCCCGAA CTATTCCTGA AGCGTGCTGT TGTTGGTGGG TTGGAACGTG TCTTTGAGAT CAACCGAAAC TTCCGCAATG AAGGCGTAGA CTCGTCACAC TCACCAGAAT TTGCGATGCT TGAGGCGTAT GAAGCCTATG GCGATTACAA CACAATGGCG GTGTTAACTC AGGATCTCGT GCAAACCGCT GCCCGTGATG CATTTGATGG GGAAACGCTA GTCACTCTTG CTGATGGTTC TGAATATGAA TTGGGTGGTG AATGGGCTCA ACTATCCATG TACCACTCTC TTTCGGAAGC CGCCGGGGTG GAGATCACTC CACAAACTTC GGTTGCTGAA TTAATGACCC TGGCACAATC TGTAGAGATT TCATTGGATC CGAAGAAGGT GAGCCACGGA AAGCTTGTGG AAGAGCTGTG GGAACACTTT GTGGGTCATG ACTTATGGGC GCCCACGTTT GTGCGTGATT TCCCCGTGGA GACGTCACCA TTGACCAGGG ATCACCGGTC AATTCCCGGT GTTGTGGAGA AGTGGGACTT GTATGTGCGT GGCTTTGAGC TCGCAACCGC ATACTCGGAA CTTGTTGATC CTGTGATTCA GCGCCAACGC TTTGAGGCAC AAGCAGTCCT TGCTGCCGCA GGCGACGATG AGGCAATGGT CCTTGATGAG GATTTCCTCA CGGCAATGGA ATATGCCATG CCGCCGAGCG GGGGTATGGG AATGGGGCTC GACCGACTGC TCATGGCTTT GACCGGGTTG GGTATTCGAG AGACTATTTT GTTCCCACTG GTCAAACCGG CACAGTAA
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Protein sequence | MTSQENTQAL SSDTGNDLPE QLKVRREKRA RLLDQGKEAY PVTVDRTHTI GQIRAGYAHL ELGEETEDVV GVAGRVVFLR NTGKLCFVAI QDGDGQRLQV MLSQGEVGAQ SLADFKATVD LGDHLFAKGR VISSRRGELS VFASQWSLAA KSLRPLPNLY AREDGTTAEL SEEARVRQRY VDLIARPAAR DAARLRSQVV RSLRDNFHAR DFMEIETPML QTIHGGAAAR PFVTHMNAFD MDLYLRIAPE LFLKRAVVGG LERVFEINRN FRNEGVDSSH SPEFAMLEAY EAYGDYNTMA VLTQDLVQTA ARDAFDGETL VTLADGSEYE LGGEWAQLSM YHSLSEAAGV EITPQTSVAE LMTLAQSVEI SLDPKKVSHG KLVEELWEHF VGHDLWAPTF VRDFPVETSP LTRDHRSIPG VVEKWDLYVR GFELATAYSE LVDPVIQRQR FEAQAVLAAA GDDEAMVLDE DFLTAMEYAM PPSGGMGMGL DRLLMALTGL GIRETILFPL VKPAQ
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