Gene Jden_2047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2047 
Symbol 
ID8381206 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2233845 
End bp2234228 
Gene Length384 bp 
Protein Length127 aa 
Translation table11 
GC content59% 
IMG OID645004799 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_003161988 
Protein GI256833261 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.716085 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCAACCG GTAAGGTCAA GTTCTTCGAC GCAGAGCGTG GGTTTGGATT CATCACAGGC 
GACGATGGTC ACCAGGTGTT CCTCCACACC ACAGCACTGC CCACTGACGC GCCCGCTCCG
AAACCAGGTG CGCGAGTCGA GTACGGTGTT GCCGACGGTC GTAAAGGCCC CCAGGCCTTG
TCCGTGCGTT ACCTGGATCC ACCGCCCTCT GTGGTTCGTG CAACACGGAA ACCAGCCGAC
GAAATGGCTG TCGTTGTTGA AGACGTCATC AAACTTCTTG ATGCGGTGGG AAACCAACTC
CGTCGTGGAC GGTACCCCGA CAAAGCATCT GCCACGAAAA CCGCGAACGT GCTCCGTGCC
ATCGCTGACT CTCTTGAGGC TTAA
 
Protein sequence
MPTGKVKFFD AERGFGFITG DDGHQVFLHT TALPTDAPAP KPGARVEYGV ADGRKGPQAL 
SVRYLDPPPS VVRATRKPAD EMAVVVEDVI KLLDAVGNQL RRGRYPDKAS ATKTANVLRA
IADSLEA