Gene Jden_2041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_2041 
Symbol 
ID8381200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp2227995 
End bp2229386 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID645004793 
Productflagellar hook-associated protein FlgK 
Protein accessionYP_003161982 
Protein GI256833255 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.848147 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCT TCTCGGGACT GTCTACTGCC CTCTCCTCCC TCAACGCACA ACGCGCTGCA 
ATGGAGATCA CTGGGCAGAA CATCGCGAAT GTCAACACGC CCGGTTACAC TCGGCAACGT
GCTGACATGA CCCCTGTGTC TGCAGGTCAA ACGGCTTCCC TCTTTTCACA GGGCGCAAAG
ATCGGGAACG GTGTGCGGAT CACAGACATT TCACGGCTAG GCGACATCTT CCTCGACGCC
CGCGTACGCA CCACCACCTC ATCGGCGAGT TACCTCACTG CACGAGCGGA GGTGTATGAA
CGTCTCGAAT CCACCATCAA CGAACCTTCG GACGACGGAA TCTCAGCGCA ACTCAACAAG
TTGTGGACAT CGTTTCAAGA CTTATCGAAC AACCCTCAAA CTCTGGCAAC CAAACAAGTC
GTGTTGGAAA ACGCCAAGCA AGTTCAACAA GGCATTGCCT CCGGTTACTC GGCGGTGTCA
ACCCAATGGA ACCAAGTGCG CGCTGAAGTG GAAGCACACG TCACCGAGGT CAACACCACT
GCAACCGCCG TCGCGGAACT CAACGGACAA ATCCGCCAGA CGCTCGTCTC CGGCGGCAAC
CCCAACGAAC TCATTGACCA ACGAGGCCAG TTACTGAACT CCTTGAGCGC GTTGACCGGC
TCAACAGTTC GCTTTCAAGA CGACGGCACC GCCGACGTCT ACGTCGGTGG GAACCCCCTG
GTCCAAGCCA ACGCCTCTCG CACACTGACC GTTGCTGGTG CTACCGCCAT CACCGGCGCC
ACGGACGCCG CATCAGCAGT CAAGGTTGTG TGGGATCGCC CCGGTAACCC TGCCGTCAGC
TTCGACGGCG GGCAAATTGC CGGGAAACTC AGCGCCCTCG CACCCGCCAC TGACGGCGGT
ATCCTCACAA CCGCAGCGAA CCACTACAAC ACCATTGCCG AATCCCTGGC AGACAAAGTC
AACGCACTAC ACAACGCCCC TCCCCTGTTT GACCTGGGGG CTGGGCCATA CGCGGCAACG
TTGAGCGTTG CCATCACCAA CCCTGCTGAC ATCCAAGCTG GTGCAGTGGG CGCCGGTGAC
TTTGATGGCT CTGTTGCCGA TGCGCTGTCC CAGTTGGGGA TCGCCACCGA CGGACCAGAT
GCGTTGTGGC AAACCGCGGC GATCGCAACA GGTGTGGCAG CAAAAGCCAC CGCAGACTCA
GCAACAGTGG CCTACGCAGC ACAATCCACC GCTGAGGGTC TGCACATCGC AGCGACATCG
GTGGACACGG ACGAGGAAAC CGTCAACCTC CTCAGCTACC AGCGCGCCTA TCAAGCAGCG
GCACGTGTCA TGACGACCGT GGACGAAATG CTTGACCAGC TCATCAACCG GACAGGAGTG
GTGGGACGAT GA
 
Protein sequence
MSTFSGLSTA LSSLNAQRAA MEITGQNIAN VNTPGYTRQR ADMTPVSAGQ TASLFSQGAK 
IGNGVRITDI SRLGDIFLDA RVRTTTSSAS YLTARAEVYE RLESTINEPS DDGISAQLNK
LWTSFQDLSN NPQTLATKQV VLENAKQVQQ GIASGYSAVS TQWNQVRAEV EAHVTEVNTT
ATAVAELNGQ IRQTLVSGGN PNELIDQRGQ LLNSLSALTG STVRFQDDGT ADVYVGGNPL
VQANASRTLT VAGATAITGA TDAASAVKVV WDRPGNPAVS FDGGQIAGKL SALAPATDGG
ILTTAANHYN TIAESLADKV NALHNAPPLF DLGAGPYAAT LSVAITNPAD IQAGAVGAGD
FDGSVADALS QLGIATDGPD ALWQTAAIAT GVAAKATADS ATVAYAAQST AEGLHIAATS
VDTDEETVNL LSYQRAYQAA ARVMTTVDEM LDQLINRTGV VGR