Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_2004 |
Symbol | |
ID | 8381163 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 2195209 |
End bp | 2197599 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645004756 |
Product | CheA signal transduction histidine kinase |
Protein accession | YP_003161945 |
Protein GI | 256833218 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.370377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGACGGCA TGGATGAGAT TGTCCGGGAA TTCCTGATCG AGAGCAACGA AAACCTCGAT CAACTGGATC AAGATCTCGT AGCACTCGAA AGTGAACCAG GATCACGTGA GCTGCTGAGC TCCGTGTTCC GGACCATTCA CACCATCAAA GGGACAAGTG GCTTCCTCGC CCTGTCAAAC CTCGAAGCAG TCGCACACGT TGGCGAGAAC CTCCTCGTCG AACTACGTGA CGGCAAACGA GACATGGACA AGCAAACCGC TGACGTCCTC CTCATGATGG TCGACACCAT TCGGGCACTG CTCACTCAAC TTGAAGAGAC AGGCACCGAA GCCGGCCTCG ACACGACCGA CACGGTTGCC GCCATCCAAG CAACCCTCGA CAACAAGCCA CTGCCAGGAG CCGCCCCCGC GACCCCAGAA GCAGACAACA CTGACGCCGA CAGCCCCACC CCCACGGACG CAGTCGATCT CAGTGCGGAC ACCATCCCGG CAACGGACAG TGCTTCCCCC ACCCCGGACC CCACCCCCGT GATCGCCACC GAACCGCCCG CTGCACCCAC CCCGGAACCA GCTCCCGCAT CGGTTGTCGC ACACGCGCAG GATGGACCGG TTACTCTCAC CGACCCCACA CCCCAGGCGA CGGGCATCGT GACACGACAA ACAGCAGCCA GCCCAGAAAC GGCACCGGCC ACCCCCACCC TCACCGAACG GCGAGTCACC TCAGACTCCT CCATCCGCGT GGACGTTGAT CTCCTCGATG AACTCATGCG GCAAGTGGGA GAGCTCGTCC TGGTCCGCAA CCAAATTTCT CAGCTCGCCG GATTCGACTC CGGTGACCTC CTGCGCTCCT CTCAACGGTT GTCACTTATC GCTTCGGAAC TGCAAGAAGG GGTTATGAAA ACCCGGATGC AGCCCATTGA GCACATCTGG TCCAAGATGC CTCGCGTTGT CCGCGACCTC GCAGCCGCCT GCAAACGAGA CGTCCGACTC GACATGGTCG GTGGAGATAC CGAACTTGAC CGGTCTCTAC TCGAATCAGT CAAAGATCCG CTCACCCACC TCGTGCGTAA CGCTATCGAC CACGGAATCG AAGCACCAGA ACGACGTGTT GAGGTAGGAA AACCACGCAC CGGTGCCCTC ACCTTGCGCG CCTACCACGC ATCTGGTCAG GTCATGGTCG AAGTCATCGA TGACGGTGCC GGAATCGATC CGGAAAAAGT TGCGGCCAAA GCAGTCGAAC GGGGACTGAA AACCGCCGAA CAACTCGACC AAATGACACC CAGCGAAATC CAGAACCTCG TGTTCCTCGC CGGGTTCTCC ACCGCCGCAC ACGTCACCAA CGTCTCCGGG CGTGGTGTCG GTATGGACGT TGTTCGCTCC AATATTGAAG CAATCGGCGG AGCAGTTGAA GTTGAGTCAG AAGTAGGACG CGGCACCACC TGGCGTCTTC GCATCCCTCT GACACTGGCC ATTATGCCGG CGCTCACCGT GCAATCAGGC AACGAAATCT ATGCGATCCC TCAAGTGAAC CTCCAAGAAC TCGTTGCGCT CGACACGGAA AAAACGAAAT CCGCGATCGA GCACATCGGG TCCGCTGAGG TGTACCGACT TCGTGGGGCA CTACTTCCAC TGGTTCGCCT CTCACGCGTC CTTGGGAAAA CGGACGACAA CGAAGGAACC GCCGTCATCG CTGTGCTCCA AGCCGACAAC CAACGTTTTG GTCTCGTCGT AGACAAGGTC ATGAACAACG AAGAAATCGT TGTAAAACCA CTGGCCACGG CGCTGAAGAA CATTGGAATC TATGCTGGTG CAACCCTCAT GGGTGACGGA GCAGTGGCGC TCATCCTCGA CATCCAGGCG ATTACTCGAC GTTCTTTGAA CGCAGAAGGC GCAGACGTCC TTGGTGCACG CATCATTGAG GAAGCAACCA CCACCTCAAG CGACACCACC GAGTACCTTG TTGTGTCAAT CGGTGAAGCA AGACGGGTCG CCATCCCGCT CGACGCGGTC ACCCGACTCG AACAGATCAG CCCCGACCGT ATCGAATCTG TGGCTGGACG CGAAGTCATG CAATACCGTG ACTCCATTGT TCCAGTCCTA CGGCTCGGCC GGTACCTGGG GGTGTACTCC GACGGTGCTG CTGAAGAAAT CCAACTGGTT ATCTTCACTC ACGACAACCG CACCGTTGCC ATCCACGTCG AAGAGATCCT CGAAATTCTC AACGACACTG GTGCCGTCCG CTCTGAAGTG GCTGACGCAG GACTCCTGGG GTCCCTCGTC CTGTCAGGAC GAGTCACTGA ACTCCTTGAT CTGCCCTCAG CGCTCACCGC AGCGGACCCA CAGTTCTACG ATGCCCCATC CACCCACGAG CACCAGTTGG CAGGTGTCTG A
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Protein sequence | MDGMDEIVRE FLIESNENLD QLDQDLVALE SEPGSRELLS SVFRTIHTIK GTSGFLALSN LEAVAHVGEN LLVELRDGKR DMDKQTADVL LMMVDTIRAL LTQLEETGTE AGLDTTDTVA AIQATLDNKP LPGAAPATPE ADNTDADSPT PTDAVDLSAD TIPATDSASP TPDPTPVIAT EPPAAPTPEP APASVVAHAQ DGPVTLTDPT PQATGIVTRQ TAASPETAPA TPTLTERRVT SDSSIRVDVD LLDELMRQVG ELVLVRNQIS QLAGFDSGDL LRSSQRLSLI ASELQEGVMK TRMQPIEHIW SKMPRVVRDL AAACKRDVRL DMVGGDTELD RSLLESVKDP LTHLVRNAID HGIEAPERRV EVGKPRTGAL TLRAYHASGQ VMVEVIDDGA GIDPEKVAAK AVERGLKTAE QLDQMTPSEI QNLVFLAGFS TAAHVTNVSG RGVGMDVVRS NIEAIGGAVE VESEVGRGTT WRLRIPLTLA IMPALTVQSG NEIYAIPQVN LQELVALDTE KTKSAIEHIG SAEVYRLRGA LLPLVRLSRV LGKTDDNEGT AVIAVLQADN QRFGLVVDKV MNNEEIVVKP LATALKNIGI YAGATLMGDG AVALILDIQA ITRRSLNAEG ADVLGARIIE EATTTSSDTT EYLVVSIGEA RRVAIPLDAV TRLEQISPDR IESVAGREVM QYRDSIVPVL RLGRYLGVYS DGAAEEIQLV IFTHDNRTVA IHVEEILEIL NDTGAVRSEV ADAGLLGSLV LSGRVTELLD LPSALTAADP QFYDAPSTHE HQLAGV
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