| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1956 |
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| Symbol | |
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| ID | 8381116 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 2146875 |
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| End bp | 2147786 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645004708 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_003161898 |
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| Protein GI | 256833171 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.942839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCGAAAA CACGTGACCG TTCCTGGCCG CCACCACCCA CACCGCTGCC ACATCCCGTT
ATTGACAATC ACACGCATCT GCAATCAATT TCCCACATCA CCACCAGTGA AGCACCAGAT
CACGGGATTC GTGGGTACAT TGACGCTGCG GTTTCTGTAG GCGTGACGCG CATGATTGAG
GTGGGGTGTG ACCTTGACGC ACTAGCCCCC ACGGTTGCGT TGACTGCCGC CCATCCAGAG
CTTCTTGGGG CGCTGGCTAT TCACCCCAAC GAAACCCCCC TCCACGCGCA CACCGCCGAC
CCAGGCCCGG ACGGTCTGGA CCCGCACTAC AGCGACCGGC ACTCCACAAG CCTGGCCGAC
GCGATCGCTA CCGTAGCGGA CCTTGCAGCC GCGCACGACC AGATCCGTGC CATTGGGGAA
ACAGGGTTGG ACTACTTTCG GTCTGGCCCC CATGGGATTG CCACCCAACG TCAAGCATTT
CGCGACCACA TTGCGATCGC GAAAGAACTC AACCTTGCCT TACAAATCCA TGACCGGGAC
GCCCACGAGG ACGTCATCGA GATCCTCCTC GCCGACGGCG CACCACAGCG GACTGTGTTC
CACTGCTACT CGGGGGACGC TGCCATGGCG CAGGTTGCGG CAGAGCAAGG CTGGTATTTG
TCGTTCGCAG GACCAGTAAC CTTCACCGCC AACACGGGGT TGCGTGAGGC GTTACGTGTC
ATTCCCACCG ATCACATCAT GGTGGAAACT GACGCCCCCT ACCTCACCCC ACACCCATAC
CGGGGGCGAC CTAACGCCCC CTACCTCATC CCGCACACGA TGGCCACGAT TGCCGCCGAA
TGTGGGCTCA CCCTTGAGCA GGCGTGTGCA CGTATCGAAC GCACCACGGT TGAGGTGTAT
GGGCGGTGGT GA
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| Protein sequence | MAKTRDRSWP PPPTPLPHPV IDNHTHLQSI SHITTSEAPD HGIRGYIDAA VSVGVTRMIE
VGCDLDALAP TVALTAAHPE LLGALAIHPN ETPLHAHTAD PGPDGLDPHY SDRHSTSLAD
AIATVADLAA AHDQIRAIGE TGLDYFRSGP HGIATQRQAF RDHIAIAKEL NLALQIHDRD
AHEDVIEILL ADGAPQRTVF HCYSGDAAMA QVAAEQGWYL SFAGPVTFTA NTGLREALRV
IPTDHIMVET DAPYLTPHPY RGRPNAPYLI PHTMATIAAE CGLTLEQACA RIERTTVEVY
GRW
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