Gene Jden_1762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1762 
Symbol 
ID8380926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1918568 
End bp1919824 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content59% 
IMG OID645004515 
ProductN-acylglucosamine 2-epimerase 
Protein accessionYP_003161708 
Protein GI256832981 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2942] N-acyl-D-glucosamine 2-epimerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0295295 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGACC ACACTGGCCC TGCGTTGACG TCTCCTGATC ACCATGCGTG GTTGCGCCTT 
CAAGCGCGCG GGTTACTTGA TTTTGCTCGG AAGACCATGG TTGCTGGTCG GGGTGCTGGG
TGGCTGACCG TCGATGGGCA GGTTGATGAC ACGCAAGCGA TTCACACGTG GATCACCGCT
CGAATGGTGC ACGCGTTTTC GTTAGGGGCC ATTCTTGGAG ATGCGCATGC CCGGGAAATT
GCGCAGGAAG GATTGGACGC GTTGCGGTCC GGTCCGTTGC GTGACAGCGA GCATGATGGG
TGGTTCGCAT CGATTCCGGT GACTGCTGGG GCTGGTGAGG TTGATTCGAC AAAGAGCGCG
TACGCTCATG CGTTTGTTGT GTTGGCGGCG TCCTCTGCCC GTGTAGCTGG GTTGTCAGGT
GCGCAAGAGT TGTTGACGCA GGGGTTGGCG ATTCTTGAGG ACCGGTTTTT TGATGCAGGC
ACGGGTTTAC ACGTCGATGA ATGGGATGCA TCGTGGTCGG TTCTTGATGA TTACCGTGGT
GTCAACGCCA ATATGCATGC GGTGGAGGCG CTTCTTGCGG CGGGTGATGT CACGGGTGAC
CCGGTGTGGC ATGAGCGGGC GTTAGGGATC GCGAAGACGG TGGCGTTGCA GTGGGCTGCC
CCCAACGGGT GGCGGATTCC TGAGCATTTC TCACCATCGT GGGAGCCGTT GCTCGAGTTC
AACGATGACC GTCGTGCTGA TCCGTTTAAA CCGTATGGGG CAACGGTTGG TCATGGTATT
GAGTGGGCGC GGTTGTTGTT GCACCTTGAT GCGACGTTCC CGGGGCAGCA CCCGTGGTTA
CAGGAGTCGG CGCGGTCGTT GTATTCGCGG GCGATTGCTG ATGGGTGGCG CCGTTCCACT
GCAGGTCACA TGGGGTTTGT GTACACGACG GGGTGGGGTG GCGAACCTAT TGTGGAAACC
CGGATGCACT GGGTTCCTGC TGAGGCGTTG GCTGCTGCGT CTGCCTTGTT CACCGCGACG
TCCGCGCCGT TTTATGCCAA GGACTACGAG CAGTGGCTTG CCCATGTGGA GCGGTTCTTT
GTTGATGAGG CGCATGGATC GTGGCATCAC GAGTTAGATA CCGCGAATCG ACCCAGTGGA
ACTGTGTGGC CAGGGAAACC CGATATTTAC CATGCCATTG GCGCTTTCTT GACCCCAACA
GTCCCGCTGA GTCCAACTCT TGCTTCGGCG TTGGCAGCAC AAACCAGCGG GCGGTGA
 
Protein sequence
MIDHTGPALT SPDHHAWLRL QARGLLDFAR KTMVAGRGAG WLTVDGQVDD TQAIHTWITA 
RMVHAFSLGA ILGDAHAREI AQEGLDALRS GPLRDSEHDG WFASIPVTAG AGEVDSTKSA
YAHAFVVLAA SSARVAGLSG AQELLTQGLA ILEDRFFDAG TGLHVDEWDA SWSVLDDYRG
VNANMHAVEA LLAAGDVTGD PVWHERALGI AKTVALQWAA PNGWRIPEHF SPSWEPLLEF
NDDRRADPFK PYGATVGHGI EWARLLLHLD ATFPGQHPWL QESARSLYSR AIADGWRRST
AGHMGFVYTT GWGGEPIVET RMHWVPAEAL AAASALFTAT SAPFYAKDYE QWLAHVERFF
VDEAHGSWHH ELDTANRPSG TVWPGKPDIY HAIGAFLTPT VPLSPTLASA LAAQTSGR