Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1647 |
Symbol | |
ID | 8380816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1776290 |
End bp | 1777777 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 645004398 |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003161598 |
Protein GI | 256832871 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.187163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.001175 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGTCAAAA CCTTCCACGT GGAATATTTT GGCCGGTTGT CCGCTACGCT GGGGTCCATG GGTGATTCAA CACACACGTC AGTTGGGGTG TCACCGCAGG GGGATGCACC GTTGTCGCGG GCAACGATTG TGCGTTATGC GGTTGGCTCG GTGGGCACAG GCGGTTTTGG GACGCTGCCT GGTTTGGTCC TCATCTATTT TTTGACTGAC ACACTGGGGG TGGCAGCTGG CCTAGCAGGG TTGGTGGTTA TCGCATCGAA AGTTGTGGAC GTCCTGATCG ACCCGGTGAT CGGGGATATC TCCGATGCGA GTGCCCGGCG TCGTGGCACG CGCGGCTACC TGATGTGGTG GGGTGCGCTC GCGTTGCCGG TGTTTTTTGT TCTCACTTTC GCGGTGCCGC CGGGGCTTGA GGGGGCTGGT GCTGCGCTGT GGGTGATGGT GGCGTTCATC GGATGCGCGG TGGGGTTTTC GTTGTTTCAG GTGCCCTATA TTGCGTTGCC GGTGGAGCTG ACAGGCCATT ATGACGAACG GACCCGACTG TTAGCGTGGC GGGTTGTGGT GTTGTCGGTC GCGATTTTGT TGTTTGGTGG CGGTGGGCCG GTGTTGCGGT CGTTGGGTGG GGATAACCAG CGGTTGGGGT ATGTCCTCAT GGCGGTGGTT GCTGGCCTGG TTATTGGGCT GGGGTTTGCG GTGGCGGCGA AAGTTGCGCC GCGCCGCCCC CCACAACACG CTCCGAGGGG GACAGCGGAA CTACGACACG GCTCACGGTT ACTGACGGGT CGCATGACCC GGTTAGGCAG CCAGTACCGT GCCGGTCTGG ACACGCTCCG CACCAACCAG CCGTTCCGGG TCCTTGTGCT CACGTTTTTC CTCCAAGCAG CAGCCACCGG GATCATGCTT GCAGGAGCCC AGTATGTGGC TACCTGGGTA CTCGACTCAG AAGCTGCCGT GACATTCCTT TTTGTTGCGC TCATTGCCCC AGCAGTGATC ATGTCCCCGG TGTGGGGTGC GGTGGCGCGG CGTGTGGGTA AAGAAAAGGC CTTCAGTTGG GCGTCGCTGA TCTTCATGGC AGGCTCAGTG TCCCTTGTGC TCCTCCTGGT AGCCCCCGGC CCCTGGGTGT ACGTTCCGGT GGCCGTGTGT GGGGCCGCCT ACGCAGGGTT GCAAGCACTG CCCATGGCGA TGCTCCCTGA CACCGTCCCC GTCCGTACCG AATCCCAAGC CGGCGTCTAC GGCGGAGTAT GGACAGCGGG GGAGACCACG GGTATGGCCC TAGGCTCTGT AGCCCTCACC GTTGTGCTCG CTGCAACCGG GTACATCGAA TCAACCGCCA CCCAGAACGT CACCCAACCT GACAGTGCAG TTGGTGGGAT CGTGGTGGCA TTCAGTGTCA TTCCCGCCCT GGCCGTCGCA GTGTCCCTTG TGTCATTGCG CGCCTACCCG CTGCGCCGAG CTGACATCAT GGCCGCGAAC GTGAAGGAGT ACCAGTGA
|
Protein sequence | MVKTFHVEYF GRLSATLGSM GDSTHTSVGV SPQGDAPLSR ATIVRYAVGS VGTGGFGTLP GLVLIYFLTD TLGVAAGLAG LVVIASKVVD VLIDPVIGDI SDASARRRGT RGYLMWWGAL ALPVFFVLTF AVPPGLEGAG AALWVMVAFI GCAVGFSLFQ VPYIALPVEL TGHYDERTRL LAWRVVVLSV AILLFGGGGP VLRSLGGDNQ RLGYVLMAVV AGLVIGLGFA VAAKVAPRRP PQHAPRGTAE LRHGSRLLTG RMTRLGSQYR AGLDTLRTNQ PFRVLVLTFF LQAAATGIML AGAQYVATWV LDSEAAVTFL FVALIAPAVI MSPVWGAVAR RVGKEKAFSW ASLIFMAGSV SLVLLLVAPG PWVYVPVAVC GAAYAGLQAL PMAMLPDTVP VRTESQAGVY GGVWTAGETT GMALGSVALT VVLAATGYIE STATQNVTQP DSAVGGIVVA FSVIPALAVA VSLVSLRAYP LRRADIMAAN VKEYQ
|
| |