Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1592 |
Symbol | |
ID | 8380761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1716466 |
End bp | 1717140 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 645004342 |
Product | polar amino acid ABC transporter, inner membrane subunit |
Protein accession | YP_003161543 |
Protein GI | 256832816 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATT TTCTTGACGT CATCACGACC TACAACATAC CCGCCGCATA CTGGGTCAAC CTCAAACTTG CATTCTTCTC TACCGTTATT GCATTAACGC TTGGTTTAGT TCTTGCCATG ATGCGTATTT CTCCGATTCC TTCACTGCGC GCTTTGGGGG CGTCCTACGT GACGCTTATG CGAAATACCC CACTCACTGT CATCATGGTG TTCGCGGTTT TGGTGTTGTG GCCAATTTTT GGTGTGAATT TCTCGCAGAA CTTTGCGCAG AATTTCTTTT GGCTCGCGGT GTTGTCGCTG TCGGTGTACC ACGCGTCATT TTTCTGTGAA GCAATCCGAT CTGGGGTCAA CACGGTGCCG GTTGGTCAAG CAGAGGCAGC ACGAGCGATC GGGCTATCTT TCCTCCCTGC AGCACGGCTA GTCATTATGC CACAAGCGTT TCGTGGTGCT ATCGCTCCGT TAGGGAATAC GATTATTGCG TTAATCAAAA ATACGACCGT TGCTGCGGCA GCGTCAGTGG CAGAGATCTC GATTCTCATG CGGGAAATGA TTGAAAATAA CGGGAACTAC GTGATCCCTA TCTTCCTCAC TATTGCTGTG GGATTCGTGG TCATTGTTAT CCCGGTGGGG ATGGCGACCA CATACTTGTC ACAAAAATTG GCGGTGTCAC GATGA
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Protein sequence | MADFLDVITT YNIPAAYWVN LKLAFFSTVI ALTLGLVLAM MRISPIPSLR ALGASYVTLM RNTPLTVIMV FAVLVLWPIF GVNFSQNFAQ NFFWLAVLSL SVYHASFFCE AIRSGVNTVP VGQAEAARAI GLSFLPAARL VIMPQAFRGA IAPLGNTIIA LIKNTTVAAA ASVAEISILM REMIENNGNY VIPIFLTIAV GFVVIVIPVG MATTYLSQKL AVSR
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