Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1446 |
Symbol | |
ID | 8380617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1555835 |
End bp | 1556476 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 645004194 |
Product | cytochrome c oxidase subunit III |
Protein accession | YP_003161399 |
Protein GI | 256832672 |
COG category | [C] Energy production and conversion |
COG ID | [COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.190204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.245723 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCGACTG AAACGGCTGC TCCCAAAGCA CAACACCACG TCAGTGTGAA TCGTCCCAAC CCAGTGTCGG TCGGGACCAT CGTTTGGCTG TCTAGCGAAC TCATGTTCTT CGCTGGACTT TTTGCGATGT ACTTCACCAT TCGCGCCACA GTGCCGGCAG AACAGTGGAG TGAGGGGACG GGACACCTCA ACCTCACCTT TGCCATGATC AACACCGCTG TTCTTGTTGC GTCCTCATTT ACATGCCAGT TTGGCGTGTT CGCTGCTGAA CGCTTCCAGC CGGTTCGTAC TGGATCCTTG CTCCAGATCA CTAAATGGGG CATGAACGAG TGGATGACAC TCACGTTCCT CATGGGATCC TTCTTCGTCG CCGGACAGGT GTTCGAGTAT GCAGAACTTG TTCAACACGG ACTCACTATC TCCTCGAGCC CGTATGGTTC TGTGTTCTAC CTCGCCACCG GTTTCCACGG ACTTCACGTC CTCGGCGGTT TGATTGCGTT CCTCCTCCTC CTTGGTCGAT CCTTTTCTGC CAAGAACTTT GGACACCGTG AGGCAACCAC AGGCATCGTC GTGTCGTATT ACTGGCACTT CGTTGATGTT GTCTGGCTCG GACTGTTTTT CGTTATTTAC TTCCTGCGTT AA
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Protein sequence | MSTETAAPKA QHHVSVNRPN PVSVGTIVWL SSELMFFAGL FAMYFTIRAT VPAEQWSEGT GHLNLTFAMI NTAVLVASSF TCQFGVFAAE RFQPVRTGSL LQITKWGMNE WMTLTFLMGS FFVAGQVFEY AELVQHGLTI SSSPYGSVFY LATGFHGLHV LGGLIAFLLL LGRSFSAKNF GHREATTGIV VSYYWHFVDV VWLGLFFVIY FLR
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