Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1383 |
Symbol | |
ID | 8380560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1481834 |
End bp | 1482664 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 645004136 |
Product | aminotransferase class IV |
Protein accession | YP_003161342 |
Protein GI | 256832615 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.778561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.0488839 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCCT GGACCGAGGG ACGTTTCATT GACCCCCATA GCCCTCTTGT GGGCGCAAGC GACCCTGGGC TGATGACCGG ACAGGGCATG TTCGACACGA TCGCTGCGTA TCACGGGCGG CTGTGGGCGC TGGAGGCACA CCTGTCCAGA TTGTCAGCGT CATTGACGGC CGCCCACATT CCGCAACCGC AGGTTGACCT TGACGAAGGC GCCCGCCTCG TCGCCGCACA CCTTCGCAAT GTGCCCGTAG GTCGGATACG AATCACGGTC CTCAACACCC ACGAAGGGTC CCGGACTGTC ATCACCGCCA CCCCTGAACC TCACGCACCC GCCTTGGGGG CACCTCACCC TACCGATGCG CGGGTTGCGA TCACCCCCTG GGCCCGCTCC CCCCTCATGC CGTTTGCTGG ACACAAATCC ACCTCCTACG CGCACAACAT TCAAGCCCTG CACTGGGCAT ACGCACAGGG AGCCGATGAA GGGCTATGGC ACGGACCCAA TGGGGGGCTC TGCGAGGGGT CGGTGTCCAA CCTCCTCACC GTTGTTGACG GCCAACTTGC AACTGCGAGC GCGCAGTGTG GGGTGTTGCC GGGGGTGACG TTGGCGGTGG TGCGTGAGGT GTGTCACGAG TTGGGTGGTG TTCGGGAGTT ATCTGCTGTG GAGGTGGGTG AGGTTGTGGG TGTTGGTCAG GGTGGGGCGT TGGTGGGGAC GTTGCGCATG ATTCAGCCGA TTGGGGTGGT GGATGGGGTG CCTGGTGAGG TGCCGGGGGT GATTCGTCGC GCTCAGGAGT TGGTGGCAGC TGCGATGCCT GATTTTCTTG CCGATGCGTG A
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Protein sequence | MIAWTEGRFI DPHSPLVGAS DPGLMTGQGM FDTIAAYHGR LWALEAHLSR LSASLTAAHI PQPQVDLDEG ARLVAAHLRN VPVGRIRITV LNTHEGSRTV ITATPEPHAP ALGAPHPTDA RVAITPWARS PLMPFAGHKS TSYAHNIQAL HWAYAQGADE GLWHGPNGGL CEGSVSNLLT VVDGQLATAS AQCGVLPGVT LAVVREVCHE LGGVRELSAV EVGEVVGVGQ GGALVGTLRM IQPIGVVDGV PGEVPGVIRR AQELVAAAMP DFLADA
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