Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1357 |
Symbol | |
ID | 8380534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 1452939 |
End bp | 1453676 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645004106 |
Product | NUDIX hydrolase |
Protein accession | YP_003161316 |
Protein GI | 256832589 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.266924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.583365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGACG CCTATCTGTC ACGTCCCGGC AACATCTCAC CCAACATCGC ATTCCCAGAT CCCAACGATC GCCCCGCGGT GAGTACTGAT ATTGCCGTAC TTACCCTGAC CCCTGAACGG GAGTTGGCGG TGGTGCTCAT TGACCTTGAC GGTCAACGTC AACTACCGGG AACGTTCATG ATGCCTGGCG AAACACTGAA GAAGTCGGCA CGGCGTGCTC TGAGTGAGTG CCTGACGCTC GAGGTGGGGG AGATACACCT CCTTGACGTC TTGGACGAAC CCGCACGCGA TCCACGCGGG TGGATGTTGT CAATCTCGTT CTTCGCAGCG GTTCCATACA GTGCTGTGGA GCTTCTCCTG GCGGAGGAGC ACGGACCAAA CCCCCCATAC CCGTTGGCTC TTGTTCCCGT GTCCGATCTG CATGTGACAT CTTTTACGGC GAACCAGTCT CAGGTGATCG AACAAGCCGT GGACAAGATC ACGCATGAGT ATGCTCTGCG GCCAGACCCC TACTACTTTA TTCCTGCAGA AGAGGTCACT CTTTTTGACC TGCGCAACGT GCACGAAATT GTCCGGGGAA AGAAGATTTT GAAGGACAAC TTCCGCAGGC GGATGACGCC TCACCTCCTC GACACTGGTC ATGTCACTCA AGGGCGATTA GGGAAGCCGG CCAGGTTATA CCGTCGGCGC CAGGTGCGGG TGCCCCGACC ACCTGCTCAG GAAACATCGT TAGGCTGA
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Protein sequence | MPDAYLSRPG NISPNIAFPD PNDRPAVSTD IAVLTLTPER ELAVVLIDLD GQRQLPGTFM MPGETLKKSA RRALSECLTL EVGEIHLLDV LDEPARDPRG WMLSISFFAA VPYSAVELLL AEEHGPNPPY PLALVPVSDL HVTSFTANQS QVIEQAVDKI THEYALRPDP YYFIPAEEVT LFDLRNVHEI VRGKKILKDN FRRRMTPHLL DTGHVTQGRL GKPARLYRRR QVRVPRPPAQ ETSLG
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