Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_1189 |
Symbol | |
ID | 8380366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 1265469 |
End bp | 1266308 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003934 |
Product | beta-lactamase |
Protein accession | YP_003161148 |
Protein GI | 256832421 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.14808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0477823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGCTG TGCAACAGAT AACAGGGTGG CCGGTGCCAC ATGCAGCGGC AGCTGTGATC ACTCCTGATG GCGTGGTGGA CACCTGGGGG CCGCAAGAGA TGGTCTTTGA GTTGGCGTCG GTCACTAAGC TGTTGACGAG TGTGGCAGTG CTTGTGGCGT TGCAAGACGG TGCGCTCACT TTAACGACTG TGGCAGGCCC CCCAGGAAGT ACAGTGCGGC ATGTGCTTGC GCACACCGCT GGGTATGAGT TTGATACTGA TGCCACCCGT GGGGCGCCGG GGGAGCGGCG CATGTATTCC AATACGGGTT TTGAGGTGCT TGCTGATGTG GTGGCTCAGC ATGTGGGCCA AGATTTTCCC AGCTATGTGC GCGATGTTGT GCTCCAGCCA TTGGGAATGA CCCACACCGA TGTGAGTGGG TCGCCGGCGG CAGGTGCACA GTCCACGGTC GCGGATTTAG CCCGGTTTGC TCACGAACTT CTTGTGCCCA CGGTGTTACG GCCCGCTACT CTTGCTGCAG CCCGTACCAC TCAGTTCCCT GATGTCGCTG GCCTTCTGCC TGGTTTTGGG CGGCAAACCC CCAACCCTTG GGGCTTGGGG TTTGAGGTCA AGGGGTCGAA GTCCCCGCAT TGGACTGGTT CGTTGAACTC CGCACGAACG TTTGGTCATT TTGGGCAGTC AGGAACCTTC TTGTGGGTGG ACCCGGACCG CCAATTGGCG TGTGTGGCGT TGACTGACCG CGCCTTTGGG CAGTGGGCGA TCCACGAGTG GCCGCCGTTT TCTGATGCGG TGGTGACTGA GTTTAGTGGT GGGAACGAGC ATCAAGATAC GCGGGTGTAA
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Protein sequence | MSAVQQITGW PVPHAAAAVI TPDGVVDTWG PQEMVFELAS VTKLLTSVAV LVALQDGALT LTTVAGPPGS TVRHVLAHTA GYEFDTDATR GAPGERRMYS NTGFEVLADV VAQHVGQDFP SYVRDVVLQP LGMTHTDVSG SPAAGAQSTV ADLARFAHEL LVPTVLRPAT LAAARTTQFP DVAGLLPGFG RQTPNPWGLG FEVKGSKSPH WTGSLNSART FGHFGQSGTF LWVDPDRQLA CVALTDRAFG QWAIHEWPPF SDAVVTEFSG GNEHQDTRV
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