Gene Jden_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_1060 
Symbol 
ID8380237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp1130162 
End bp1131094 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content57% 
IMG OID645003801 
Productprotein of unknown function DUF75 
Protein accessionYP_003161019 
Protein GI256832292 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.419014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCGG ATCTTTATGA CTTCCACAAA GACACCTATG ACGAACTACG GACCCGGACC 
GAGACGTCAG CGGTAGGACC TGTGCTTGTG CTTGCACTAC GTCCACTTGT CGACGCCGGC
CATGTCACAG AGATCATCGC CGAACACCTC ACCGCTCATG GAAACCCGCG TCCCTTTGCC
ACCTTCGACC ACGACCAATT GATTGACTAC CACGCCAGGC GTCCCACCAT GGTATTCGAC
GTCCACCATT GGACTGAATA CCGGCAACCC CATATTTCCC TTGACCTGCT CCACGACGCC
GAAGGCACCG ACTACCTTCT CCTTCATGGC TTGGAACCTG ACCGGCGCTG GGACGGCTTT
ACCCAGGCGG TCCTTGACCT CATTGAGGAC TTCAACGTGT CGTTAGTCGT GAGCGCGTAT
GGACTTCCCA TGGGCATACC CCACACGAGA GAACACGGAG CGATTCTCCA CGCCACTCGG
GAAACCTTAT TGACAGCCCA ACCCAAATGG GTCGGGAAAG TGGAAGTACC CGCGACAGTG
AGTAACCGCA TCGAGTTTGA ACTAGGCCTT CGTCACCGTG ACGCAGTAGG AATCGCGGCC
CACGTCCCGC ATTACCTCAT CCAGTCGCAG TACTACCCTT CAGCGCTCAC TGCCGTCACT
CGAGTCGAAG ACGTGACAGG GCTGGACCTC GCATCAGCGG ACATCGCGCA AGCAGCTGTG
GAAGCACGAA TCGAAGTGGA CCGGCAAGTA GCACAATCGC CCGACATCCA CGAGGTAGTC
ACCGGACTGG AGAACCAGTA CGACGCCTTC ATGGCAGCAA AAGACCGTGA ATCGTTACTT
GCAGATGATC CGCTTCTTCC CAGCGCCGAT GAACTTGGTG CGGAGTTTGA GGCGTTCCTC
CAGCGTGAAT GGCGCAAAGG TCAATCCCAC TGA
 
Protein sequence
MSSDLYDFHK DTYDELRTRT ETSAVGPVLV LALRPLVDAG HVTEIIAEHL TAHGNPRPFA 
TFDHDQLIDY HARRPTMVFD VHHWTEYRQP HISLDLLHDA EGTDYLLLHG LEPDRRWDGF
TQAVLDLIED FNVSLVVSAY GLPMGIPHTR EHGAILHATR ETLLTAQPKW VGKVEVPATV
SNRIEFELGL RHRDAVGIAA HVPHYLIQSQ YYPSALTAVT RVEDVTGLDL ASADIAQAAV
EARIEVDRQV AQSPDIHEVV TGLENQYDAF MAAKDRESLL ADDPLLPSAD ELGAEFEAFL
QREWRKGQSH