| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_1021 |
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| Symbol | |
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| ID | 8380198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 1083932 |
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| End bp | 1084933 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003762 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_003160980 |
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| Protein GI | 256832253 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGATC CTCGGGAGCA ACTGCAGTTC GGTCACAAGG GATCTCGTGG TAAGGACGCT
CAGCCACGGC AACCTCGGCG TCCCACGGCT GCTGACGGCA TCATTGTGGT TGATAAGCCA
ACAGGTATGA CGAGCCACGA CGTCGTCGCG ATAATGCGTC GGCTGGCGGG GACACGCAAG
GTTGGGCATG CGGGAACCCT TGATCCGATG GCGACCGGAC TTTTGGTCGT GGGTGTGGGG
CGGGGAACGC GCCTACTTCA CTTTCTGACG GCCGCGGATA AGTCCTATAC GGCAACTGTG
CGTCTTGGGG TGGCCACTGT GAGCGAGGAT GCTGACGGTG ATGTCACGGA CACGCAACCG
TGTGATCATG TGACTCGAGA ACAATTGCAG GCTGCTGCTG CTCGACTGAC TGGAGTTATC
GACCAGGTTC CTAGCGCTGT CAGTGCTGTG AAGATTGATG GGCGTCGTGC CTACGACCGT
GTCCGTGCGG GGGAGGACGT GGTGTTGCCT GCCCGTTCGG TGACGGTGAG TCGGTTTGAC
ATTGTCGATG TCGTTGACGG TCCGCCACAT CACGGTGTGG CGACAAAGGA TGTTCTTCTG
TCAGTCGATG TGTCAAGTGG AACCTATGTG CGGGCGCTTG GCCGGGATTT GGCTCAAATT
GTGGGAACTG TTGGACATTT GGTGGCGTTG CGGCGGACCC GTGTCGCTGA GTGGACTCTG
GCTGAGGCCC GTAGTGTGCC GCAATTGCAG GACACCGATC CGACTGTGCC GCTGGATGTC
ATGGATTTGG GCTCTGCGGC TGAACGCGCG CTTCGTGTGT GGCGGGTCAG TGAGGCTCAG
GCGGGGCGTC TTGCGCATGG TCAGCGTCTG ACTACTGAGT TGTCTGGGCA GTATGCGGCG
GTGAGTGAGG CTGGCGAGTT GGTTGCGGTG GTGCAGTGCG GTCAAGGGGT GGCACGGCCG
GTGACGGTGT TTGTGTCGGG TGTACAAGGA GCGTCCTCGT GA
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| Protein sequence | MNDPREQLQF GHKGSRGKDA QPRQPRRPTA ADGIIVVDKP TGMTSHDVVA IMRRLAGTRK
VGHAGTLDPM ATGLLVVGVG RGTRLLHFLT AADKSYTATV RLGVATVSED ADGDVTDTQP
CDHVTREQLQ AAAARLTGVI DQVPSAVSAV KIDGRRAYDR VRAGEDVVLP ARSVTVSRFD
IVDVVDGPPH HGVATKDVLL SVDVSSGTYV RALGRDLAQI VGTVGHLVAL RRTRVAEWTL
AEARSVPQLQ DTDPTVPLDV MDLGSAAERA LRVWRVSEAQ AGRLAHGQRL TTELSGQYAA
VSEAGELVAV VQCGQGVARP VTVFVSGVQG ASS
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