| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0999 |
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| Symbol | |
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| ID | 8380176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 1057349 |
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| End bp | 1060039 |
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| Gene Length | 2691 bp |
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| Protein Length | 896 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 645003740 |
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| Product | helicase, putative |
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| Protein accession | YP_003160958 |
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| Protein GI | 256832231 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.303006 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACAG TGATTGAGGA AATCGCGGCA ATTGATGAAG TGATTAGCAA CAATATCGCT
GAACTTTCGA TGAACCGAGG GCTGCTTTCG CAGAATGCTC TCGCACAGGC CCGAAATCTA
GTTGATCAGG TGAGCTTGCT CGCCTTCACG GGCGACAAGA CGACAGATAG CAATTGGGGC
GGTCTTCATA AAGCTAAAAA GTACGTCGCC GGTCGAGGGG ACTTGAAGTT CCTACACAAG
TTCTACGGCC ATCTTGATAT TTCAGCTTCT CACTACACGG TTGATGGTGA TGGAGCTGAG
CGATTGATGC TCAAGTACTA CGAGTATCTG TTAAGGATCA AGCAGTATCT GTGGTCCGCG
CACCAGATCG AGATCTTTCA CAATCTGAGC GACTTCCCGC TCGACCTGGA TCCTGCGCTT
ACCGAGTATC ACCAGAAGAT TGCAGAACGG GTCTTAGAAG ACAAGCTGAA TCCTCGCTTG
CCTAGCCGTT CGTCAAACTT CTATATTCAC AAGATCGTCC CAATTTTTGT TGGGGGACGA
ATCATGTACG AGGTGACTTT CACCCCTGCC GTCGGATGGT CAAGCAAATT CGACAGGCTC
ATCGCCTTCA CAGACCTAGA AATCCTAGAC AATCACGCTG TTGACCTTGA ACTCGTTGAT
CATGAAATAG GCGTGCTCAA GCAAAAGATG CCGATTCGGG TGATCAGGGC ATGGTCGGTC
TCCGTTAGAC CATGTGAATT TGAGAACCTT GGTCGCCTCT TCGGGGATAT GGAACGAATT
CGGCGCAGCA AAGACTACCG AGTACTGATG AGTTATATGA CTCGTTATCA CTACTGTCTT
CTGGACATCA TTGACCTTTC GGATCATGAT TTTGCTGAAC TCATGGATCG CATGACGGAA
GCGAGTAGCA CCTCAAGAAT CAGAGATTTG CTCGTCCAAG TACGCACTTA CTGTCGGCGG
AAAGAAGTCG GAACAAACGT GATTCGCTAT CTCCTTTTCC GCGCACGGAA CGAATGGATC
AAACGACAGA AGACCTCTTG GGGCGAGGAG GGTCTGGGTG ACACCAGGAT CCGAAGGAAG
TCCTATTCCT TTGAGAAGAT GCCATTCTAT GCATCGCTCG CTGAGCACAA TCCGCCGCTT
GCTGATGTCT TCGCTTCAGT AGGTTTTCAA GGCAGAGAGC ATGAAATGCT CGCACGAAGA
ATTCGATCCA ACGTGGAACA GCGTGCCTCG CTTTACACGC CCATCGCTGA GCTTGCAAGC
TTCGGCGACG TAGAACGCCT TTCACGGCTT TACAACGCAC GACTGCCCAA TTCTCACCCA
GGTCGGACTC TCATCCTTGA TAAGGGTCAC GTTTGTATCC AGGAGTATGA AGAGACCAGC
GCAAGAATCC TTAATCGCCT CGATGAGCTG AGCTGCTCAG GGGTGCAAGG ATACACCGCA
TCAGTCGACG CGTGGCTGGA CAGTGGGGTG TATCCCATTG GAGATGAAGT CAAGCGATCA
GCGATTCGTG AACTGTTCTC GCAATCCAAA GTCGCCTTGA TATACGGTGC TGCTGGTACC
GGAAAATCAA CAATGATCAA GCACGTCTCG GAGTACTTTG CGGATTCCAA CAAGCTTTAT
CTTGCGCAAA CTCACCCAGC AGTAGACAAC CTCCGGCACA GGGTGGGAGT CGGAACGAAC
CGTGAGTTCC GAACGATTGC GAGCCACAAG AACCAAGGTG GAAGCTGCGA CATACTTTTC
ATAGATGAGT GCAGCACTGT CAGCAATGAA GATCTCATCA AAGTACTTGA GAAGACCAGC
TTTGACCTGC TGGTACTTGT GGGCGATGTC TATCAGATTC GATCTATCAA GTTCGGAAAT
TGGTTCAGTC TTGCTCGTCA AGTTATCCCG CCGACCTCCA TTTTTGAGTT GACGAAACCC
TTCCGTACGA CAGACAAGAA TCTGCTCATG TTCTGGGATG CAGTGAGGCA CCGTGAAGAC
AACATTGAGG AGTTCATGGC GCGGAGCAGA TACTCAACGA AGCTGAATGA ATCGATATTT
GAGCGAGGCG ATGAGAGCAG CGACGAGATC ATACTCTGTC TGAACTATGA CGGTCTCTAC
GGGATAAATA ACATCAATGG CTTCTTACAG AGCACAAACC AGAACCCTCC GGTCGTCTGG
GGTCAGCAGA CCTATAAGGT TGGAGACCCT GTGCTGTTCA ATGAGTTGAG CTTGTACAGG
CCGCTTATAT ACAACAACCT CAAAGGTGTT CTGGCTGGGA TAGAAGACTA TGGCAGTCAC
ATAGATTTCA CTGTTCGTCT CCTTGGCAAG ATTTTTACTG AGGAGGAGGC TGAAGAATCA
GGTCTTGAAT TCATTGATAG CCAAACAGTG AAGCTCACAG TCCTCCATCG AGCTAATAAC
GATGAGGATG ATACCGACGA ACACAAGACC TCAGTAGTGC CCTTCCAAGT CGCATATGCA
GTTTCAATTC ACAAGGCACA AGGGCTCGAA TACGACTATG TTCGGCTCGT GATCACCGAC
AGCAACGAGG ATCAGATCAC CCACAACATC TTCTACACGG CCATCACTCG TTCCAAGAGT
CGGCTCAAGA TTTACTGGAG CGCCGAAGCG CAACGACGAA TCATTGACAG TTTCCAGGAG
CAGCCGAAAA ACAAGGATCT CGGACTATTG AAAGCGAGAC AGAAAATCTA G
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| Protein sequence | MATVIEEIAA IDEVISNNIA ELSMNRGLLS QNALAQARNL VDQVSLLAFT GDKTTDSNWG
GLHKAKKYVA GRGDLKFLHK FYGHLDISAS HYTVDGDGAE RLMLKYYEYL LRIKQYLWSA
HQIEIFHNLS DFPLDLDPAL TEYHQKIAER VLEDKLNPRL PSRSSNFYIH KIVPIFVGGR
IMYEVTFTPA VGWSSKFDRL IAFTDLEILD NHAVDLELVD HEIGVLKQKM PIRVIRAWSV
SVRPCEFENL GRLFGDMERI RRSKDYRVLM SYMTRYHYCL LDIIDLSDHD FAELMDRMTE
ASSTSRIRDL LVQVRTYCRR KEVGTNVIRY LLFRARNEWI KRQKTSWGEE GLGDTRIRRK
SYSFEKMPFY ASLAEHNPPL ADVFASVGFQ GREHEMLARR IRSNVEQRAS LYTPIAELAS
FGDVERLSRL YNARLPNSHP GRTLILDKGH VCIQEYEETS ARILNRLDEL SCSGVQGYTA
SVDAWLDSGV YPIGDEVKRS AIRELFSQSK VALIYGAAGT GKSTMIKHVS EYFADSNKLY
LAQTHPAVDN LRHRVGVGTN REFRTIASHK NQGGSCDILF IDECSTVSNE DLIKVLEKTS
FDLLVLVGDV YQIRSIKFGN WFSLARQVIP PTSIFELTKP FRTTDKNLLM FWDAVRHRED
NIEEFMARSR YSTKLNESIF ERGDESSDEI ILCLNYDGLY GINNINGFLQ STNQNPPVVW
GQQTYKVGDP VLFNELSLYR PLIYNNLKGV LAGIEDYGSH IDFTVRLLGK IFTEEEAEES
GLEFIDSQTV KLTVLHRANN DEDDTDEHKT SVVPFQVAYA VSIHKAQGLE YDYVRLVITD
SNEDQITHNI FYTAITRSKS RLKIYWSAEA QRRIIDSFQE QPKNKDLGLL KARQKI
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