| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0959 |
|---|
| Symbol | |
|---|
| ID | 8380136 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | - |
|---|
| Start bp | 1013286 |
|---|
| End bp | 1014068 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645003700 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003160918 |
|---|
| Protein GI | 256832191 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAGC CCATCGTCAA CATCCATCAG CTCCACAAAT CCTATGGTGA GCGCGAAGTA
CTGACCGGAA TCGATGTAAC GATCAATGCT GGTGAAGTTG TCTGCCTCAT CGGCCCGTCA
GGATCGGGCA AATCAACACT TCTTCGCTGT GTGAACCAAC TGGAGCACGC AACATCCGGT
ACTGTCACCG TGCTGGGTCA GACCATCGCC GCTGATGATC ATGAACCCGA TATTGACATT
GACGACCTCC GTTCCCGTGT TGGGATGGTT TTCCAACAGT TCAACCTATT CGCACACATG
ACAGTGCTTG AGAACTGCAC CATCGCACAA CGCCGCGTCT TGGGTCGAGG AAAAAAGGAA
GCAGAGCGTA TCGCCCACCT GAACCTCGAA CGGGTCGGCC TTGGCGATCG TGGCTCCTCC
TACCCCCGGC AGCTATCGGG TGGGCAACAG CAGCGAGTGG CCATCGCTCG CGCACTGTCG
ATGGACCCTG AACTGATGCT GTTTGACGAA CCAACGTCAG CGTTAGATCC CGAATTAGTC
GGAGATGTTC TCACTGTGAT GCGTGAGTTG GCCGAACAAG GCATGACCAT GCTTGTAGTC
ACCCACGAAA TGGCTTTCGC GCGTGATGTG GCGGATCGGG TGGTGTTTAT GGATCAAGGT
GTCATCGTTG AGGAAGGCCC CGCGGAACAG GTGATTAACT CACCGTCTCA GGAACGCACC
CAACAGTTCC TCAAGCGCGT GCTGGACCCC ACTCACGCAT CGTTGACAGA CACTGACCGA
TAA
|
|---|
| Protein sequence | MTQPIVNIHQ LHKSYGEREV LTGIDVTINA GEVVCLIGPS GSGKSTLLRC VNQLEHATSG
TVTVLGQTIA ADDHEPDIDI DDLRSRVGMV FQQFNLFAHM TVLENCTIAQ RRVLGRGKKE
AERIAHLNLE RVGLGDRGSS YPRQLSGGQQ QRVAIARALS MDPELMLFDE PTSALDPELV
GDVLTVMREL AEQGMTMLVV THEMAFARDV ADRVVFMDQG VIVEEGPAEQ VINSPSQERT
QQFLKRVLDP THASLTDTDR
|
|---|
| |