| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0852 |
|---|
| Symbol | |
|---|
| ID | 8380035 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 918446 |
|---|
| End bp | 919498 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645003593 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_003160817 |
|---|
| Protein GI | 256832090 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000040667 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGCCAG TATCCCAGGA GCTTGATCCA CAACGCACGG ATGCTCATCG CATTGACGAC
GCGTTCCTTC GTGGACCTGC AATCTACAAC GAAGAAGCTC TTTGTGAAGT CACTGGGGCG
ACGTCAGCAC AGGTCAACTC GTATTGGCAG GCATTAGGTT TACCTGTGAC TGACCGCAGC
GCTGTCATAT TCACCAACGA CGACGCCCAC GCCCTGAAAT CAATTCTTGC GTTGGCGGAG
GCAGAACAGT TCGATCACCG TACCCTGACC TCACTCATCA GGTCAGTGGG GCACACAGCG
GACCGGTTAG CGCTCTGGCA AGCCGAAGCG CTCGTGGAAC ATCTTGCCCA CAACTTCGAC
CTTGATGATG TCCAAGCCCG CAGGGAGATG CTCCGCAAAC TGCCAGACAT CATTCCTGTG
CTTGAAGAGC AAGTTCTCCA CGCGTGGCGG CGCCAATTCG CGGCTCTCGC AGGCAGGTGG
TCTGTGGAAT TTTCCGGGGA ACGGCCAGAA CACACTCGTG GTGGTGGTGT CCTTCCGTTA
CCCCGTGCGG TGGGATTCGC AGATATTGTC TCGTTCACCT CCCAGACCGC GACAATGCGG
TCATCCGAAC TGTCGAACTT TGTGTCGAAC TTTGAAGCGT CCGCACGTGA TGTCATCACA
CGTGCGGGCG GTCGGGTTGT CAAAACAATC GGGGATGCTG TGCTGTACAT CGCCGACGAT
GTGTACACCG GGGCGCACGT GGCGTTAGGT CTCGCGCAGG CAGGGCAGTC AACAGACGAC
GCTGATGCTG ATGTCCCCCC GGTGCGAGTG TCCTTAGTGT GGGGCAGGGT GCTGTCACGA
TTTGGGGACG TCTTTGGGCC ATCAGTGAAC CTCGCTGCCC GTCTCACCGA TGTTGCAGAC
CCTGGTGAGG TCCTTGTCGA CCCCCACACC GCAGCGTTGC TCGCTGGCGA TCACCGATTC
GCGCTGACTG GTAAAGAAGA ACGCGACATG CAAGGAGTGG GAGCTGTCGC ACCCGTTAGG
GTGCAGTGGG CGTACTCTCC ACAGGGACGA TAA
|
|---|
| Protein sequence | MVPVSQELDP QRTDAHRIDD AFLRGPAIYN EEALCEVTGA TSAQVNSYWQ ALGLPVTDRS
AVIFTNDDAH ALKSILALAE AEQFDHRTLT SLIRSVGHTA DRLALWQAEA LVEHLAHNFD
LDDVQARREM LRKLPDIIPV LEEQVLHAWR RQFAALAGRW SVEFSGERPE HTRGGGVLPL
PRAVGFADIV SFTSQTATMR SSELSNFVSN FEASARDVIT RAGGRVVKTI GDAVLYIADD
VYTGAHVALG LAQAGQSTDD ADADVPPVRV SLVWGRVLSR FGDVFGPSVN LAARLTDVAD
PGEVLVDPHT AALLAGDHRF ALTGKEERDM QGVGAVAPVR VQWAYSPQGR
|
|---|
| |