Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0819 |
Symbol | |
ID | 8380002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 879740 |
End bp | 881569 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645003560 |
Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
Protein accession | YP_003160784 |
Protein GI | 256832057 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup [TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAATTCC ACCAATACGA CGTCGTCATC GTCGGCGCAG GTGGCGCCGG CATGCGCGCC GCCCTCGAAG CATCAACTGA GGTACGAACC GCTGTTATTT CTAAGCTCTA CCCCACCCGA TCCCACACAG GCGCAGCCCA AGGCGGCATG TGTGCAGCAC TGGCCAATGT CGAAGAAGAC AACTGGGAAT GGCACACCTT TGACACCGTC AAAGGTGGCG ACTACCTCGT TGACCAAGAC GCCGCCGAGA TCATGGCCAA AGAAGCAATC GACGCCGTGC TCGACTTAGA ACGCATGGGG TTACCCTTCA ACCGCACCCC CGAGGGGCGC ATCGACCAGC GGCGTTTTGG TGGCCACACC CGAAACCACG GAGAAGCCGC AGTCCGGCGT GCCTGCTACG CAGCAGACCG CACCGGGCAC ATGATTTTGC AGACCCTTTA CCAAAACTGC GTGAAACAGA ACGTGGAGTT CTTCAACGAG TTCTACGTCC TTGACCTCAT TGTTGACCAC GACCTCTCCG CTGGAGATGT CCCCGTGGGC GAAGAAGTCA CCGCGACCGG TGTTGTCGCC TACGACCTCG CCACCGGTGA GATCCACATC TTCCAAACAA AAGCAGTGGT GTTCGCTACC GGTGGTGCCG GCAAGATCTA CAAAACAACC TCCAACGCCC ACACCCTCAC CGGTGACGGA ATGGCCCTGG CGTTGCGGCG CGGGCTCCCC CTCGAAGACA TGGAATTCTT CCAATTCCAC CCCACAGGTC TTGCTGGACT GGGCATTTTG CTGTCCGAAG CTGCACGAGG AGAAGGTGGG ATTCTCCGCA ACGGCCAAGG CGAACGGTTC ATGGAACGGT ACGCCCCAAC CATTAAAGAC CTTGCACCAC GTGACATTGT GGCTCGTTCC ATGGCAAACG AAGTCCGTGA AGGTCGTGGA GCAGGACCCA ACAAAGACTA TGTCCTGTTG GACCTTACCC ACCTTGAACC CGCACACATC GACGCTAAGC TGCCCGATAT CACCGAGTTC GCACGCACAT ACCTCGGCAT TGAGCCCTAC ACCGAACCTG TTCCGGTTTA CCCCACCGCC CACTACGCTA TGGGCGGGAT CCCCACCACA ATCGACTCTG AGGTTCTGCG GAACCCGAAC GATGTTGTCA AAGGTCTCTA TGCCGCTGGT GAAGTCGCGT GCGTGTCCGT CCATGGCGCG AACCGTCTAG GCACGAACTC ACTCCTTGAC ATCAACGTGT TTGGGAAACG TGCTGGACGT GCCGCAGCAG CCTACGCAAA GACAGCGTCC TTCGTTGATC TTCCCGACCA AGCAGCATCC TGGGTCGTGG GACAACTGGA AGAGTTGCGC TCACGTCCTG ACGGTGAACG TGTGGCGGAT ATCCGCAAAA CACTCCAAGA AACCATGGAC GCTAACGCGC AGGTCTTCCG GACCGAGGAA TCACTCACCC AGGCGCTCGC CGACATCCGC ACCCTTCAAG AGCGTTACAG CCGAGTTTCA GTTCAGGACA AAGGCAAAAT GTTCAACACT GACCTCCTGG AAGCGCTTGA ACTTGGGTTC CTCCTTGACA TTGCTGAGGT CACCGTCATC GCAGCATTAA ACCGCCGTGA ATCTCGTGGT GGTCACTTCC GTGAAGACTT CCCAGACCGC AACGACGAGG CCTACATGCA CCACACCATG GTGTACCGGC GCCCGCTCGA CTCTTCGGTG TCTGGAAACA TCACCGACGA GGCTTTCTCC CACGTCAGCG AATTTGACGA CTACAAGGTT GTGCTCGGCG CAAAACCCGT CGTGCAAACA AGGTACGAGC CGATGGAGCG TAAGTACTGA
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Protein sequence | MQFHQYDVVI VGAGGAGMRA ALEASTEVRT AVISKLYPTR SHTGAAQGGM CAALANVEED NWEWHTFDTV KGGDYLVDQD AAEIMAKEAI DAVLDLERMG LPFNRTPEGR IDQRRFGGHT RNHGEAAVRR ACYAADRTGH MILQTLYQNC VKQNVEFFNE FYVLDLIVDH DLSAGDVPVG EEVTATGVVA YDLATGEIHI FQTKAVVFAT GGAGKIYKTT SNAHTLTGDG MALALRRGLP LEDMEFFQFH PTGLAGLGIL LSEAARGEGG ILRNGQGERF MERYAPTIKD LAPRDIVARS MANEVREGRG AGPNKDYVLL DLTHLEPAHI DAKLPDITEF ARTYLGIEPY TEPVPVYPTA HYAMGGIPTT IDSEVLRNPN DVVKGLYAAG EVACVSVHGA NRLGTNSLLD INVFGKRAGR AAAAYAKTAS FVDLPDQAAS WVVGQLEELR SRPDGERVAD IRKTLQETMD ANAQVFRTEE SLTQALADIR TLQERYSRVS VQDKGKMFNT DLLEALELGF LLDIAEVTVI AALNRRESRG GHFREDFPDR NDEAYMHHTM VYRRPLDSSV SGNITDEAFS HVSEFDDYKV VLGAKPVVQT RYEPMERKY
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