Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0723 |
Symbol | |
ID | 8379908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 783183 |
End bp | 784259 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645003464 |
Product | hypothetical protein |
Protein accession | YP_003160690 |
Protein GI | 256831963 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3480] Predicted secreted protein containing a PDZ domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTGACT CCCAGCCTGA TGTACCACGT TCTTCGCGCC GCCATCTGAC CTTTGCGGTG TCGACACTCC TGACTGCTCT GTTACTTGCA GCATTGATGT GGGTGCCTGC GCCGTACGTT GTGCGTACTC CTGGTCCCAC GAAGGATGTG CTTTCGGAGG TCAACTCCCA ACCTCTCATC ACGATCTCTG ATGAGGAGAG TTACGACCCC TCAGGTCAGC TGCTTCTCAC CACGGTGGGG GTTCAGGGCG GGCCGGCAGC AAACGTGTCG TTTGCGCAAG TGCTCATGGG CTGGCTGGAT TCCGATCGCG CAGTGTACCC GGTAGAAACG GTGTACCCAC CGGAATCAAC ACAGGAAGAG ATCGAGACGG TGAACAACGC GCTGATGGTC ACGTCGCAAG AAAACGCAAC CTACGCTGCG CTGACTGAGC TGGACTACAC GGTGCCGATG ACGTTGACGG TTCAAGAGGT CCTTGATGAA TCGCAAGCAC ATGATGTTGT GCGCAGCGGT GACGTGCTTG TGTCACTTAA TGGGCAAGCA ATTGACACGT ATGCGACGCT TGTTAGTCAG TTGGATGCGG TGACACCCGG AGAGGCAGTG ACCTTAGAGG TGATGCGGGA GGGGGAACTC GCGGAAGTGA GTGTCACGAC TATCGGGTCG CAAGACTCCT CAGGTGCGCG TCTTGGGTTG ACGATCGACA TTGGGTTCGA TTTTCCGTTT GATGTCGGGA TCGCCATTGA CAACATTGGC GGACCAAGCG CAGGAATGAT TTTTGCCCTG GGGATCATGG ACATGCTCAC TGAAGCCGAC GAACTTGACG GTGCTGTGGT CGCTGGTACA GGCACGATCG ACACCGAAGG CAATGTGGGG CCCATTGGGG GCATCCGGCA AAAACTTCAT GGCGCCAAAC GCGACGGGGC TGAATGGTTC CTTGCTCCTG CGTCGAACTG CGACGAGGTT GTGGGACACA CCCCAGAAGG ACTTGATGTC ATTGCGGTGG AAACCCTGAG CGACGCTTGG ACCGCTGTTC AAGCAATCGG GAGTGGTGAC ACCGACGATC TTGCCCGGTG CAGCTAA
|
Protein sequence | MTDSQPDVPR SSRRHLTFAV STLLTALLLA ALMWVPAPYV VRTPGPTKDV LSEVNSQPLI TISDEESYDP SGQLLLTTVG VQGGPAANVS FAQVLMGWLD SDRAVYPVET VYPPESTQEE IETVNNALMV TSQENATYAA LTELDYTVPM TLTVQEVLDE SQAHDVVRSG DVLVSLNGQA IDTYATLVSQ LDAVTPGEAV TLEVMREGEL AEVSVTTIGS QDSSGARLGL TIDIGFDFPF DVGIAIDNIG GPSAGMIFAL GIMDMLTEAD ELDGAVVAGT GTIDTEGNVG PIGGIRQKLH GAKRDGAEWF LAPASNCDEV VGHTPEGLDV IAVETLSDAW TAVQAIGSGD TDDLARCS
|
| |