| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0507 |
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| Symbol | |
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| ID | 8379692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 550334 |
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| End bp | 551521 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003239 |
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| Product | histone deacetylase superfamily |
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| Protein accession | YP_003160474 |
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| Protein GI | 256831747 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0375455 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATTG TCTCCCAGGT GTCCTGGTCT GCTGAGTTGC TCGCTTATGA TTTTGGACCC
ACTCACCCCA TGTCACCGTT ACGGCTTGAT ATGACGATGC GGTTGTTGCG CGAGTTAGGG
GTAGTTACTG GCCCAATGGT GCGGTTGGTG GGAAGCGGTG TTGCGGGTCG TGACCTGTTG
GAGATTGTCC ATGAACCTGC CTACGTTGAT GCGGTGATTG ATGCGTCACG TGGCGGTGTG
GTGGATGAGG TACGCGGGTT GGGTACGGAC GACACCCCGG GGTTTGCGTT GATGCATGAG
GCGGCTGCCC GGATGACGCA GGCAACGGTT GATGCGGCGG ATGCGGTGTG GCGGGGTGAT
GCGTTGCATG CGGTGAATTT GTCGGGTGGT ATGCATCATG CGATGCCAGG TGCTGCGTCG
GGGTTTTGTG TGTACAACGA TGCTGCTGTG GCGATTCGTC GCCTGTTGGA TCAGGGTGCT
TCCCGGGTTA TGTATGTGGA TGTGGATGCG CACCATGGGG ATGGTGTGGA GGCTGTGTTT
TGGGATGATC CACGGGTGTT GACGGTCTCG ATTCACCAAA GTGGGGCGAC GTTGTTTCCG
GGGACGGGGT TTGCCACTGA TGTGGGGGGA CCGCGGGCAC TGGGGACAGC GGTGAATGTG
GCGCTACCGC CGCGCACGGG GTCGGCGCAG TGGTTGCGGG CGTTGGATGC GGTGCTACCT
GAGGTGGCTC GGGCTTTCGG TCCTGATGTG ATTTTTTCTC AGCATGGGTG TGATGCGCAT
GCTCTTGATG TGCTCTCTGA TTTGAGGGTA AGTGTTGCTG CGCAGCGGCG CGCCGCGATG
ATGATTCATG ATCTGGCGCA TGAGTTATGT CAGGGGCGCT GGGTTGCGCT GGGTGGGGGC
GGGTATTCGG TTATTGATGT GGTTCCGTTG GTGTGGGCGC ATGTGGTGGC TATCGCTAGC
CATGTGCCGT TGGAGTGCGA CCAGCCCACT CCACCTCAGT GGCGTGCCTT TATTGAGGTG
ATGCTGGACC ATGAGCCCCC GTTGACGTTG GGCGATGGCG GGGAAAGTGA CCAGTTCACT
GCGTGGAGCG CGGGGTGGGA TCCGGCTGAT GAGGTTGATC GGGCGATCCG GGCGACTCGG
TTGGCTGTTT TTCCTCACGT GGGTGTGGAC ACGTCGTTGG ATCTATGA
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| Protein sequence | MSIVSQVSWS AELLAYDFGP THPMSPLRLD MTMRLLRELG VVTGPMVRLV GSGVAGRDLL
EIVHEPAYVD AVIDASRGGV VDEVRGLGTD DTPGFALMHE AAARMTQATV DAADAVWRGD
ALHAVNLSGG MHHAMPGAAS GFCVYNDAAV AIRRLLDQGA SRVMYVDVDA HHGDGVEAVF
WDDPRVLTVS IHQSGATLFP GTGFATDVGG PRALGTAVNV ALPPRTGSAQ WLRALDAVLP
EVARAFGPDV IFSQHGCDAH ALDVLSDLRV SVAAQRRAAM MIHDLAHELC QGRWVALGGG
GYSVIDVVPL VWAHVVAIAS HVPLECDQPT PPQWRAFIEV MLDHEPPLTL GDGGESDQFT
AWSAGWDPAD EVDRAIRATR LAVFPHVGVD TSLDL
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