Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0482 |
Symbol | |
ID | 8379667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | - |
Start bp | 519013 |
End bp | 521742 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645003214 |
Product | MMPL domain protein |
Protein accession | YP_003160449 |
Protein GI | 256831722 |
COG category | [R] General function prediction only |
COG ID | [COG2409] Predicted drug exporters of the RND superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCG CGCTGTATAA CCTCGGCCGT TACCTTTCCC GGCACAAAAT CGCCACTGTC CTCACCTGGC TCATGATCAT TGTGCTCAGT GTGGCTGCGG CGGTGTTGTC TGGTGGAAAG TTCAACGACA ACCTCTCCAT TCCCGGCACT GAAGCACAGG AGGGGTTAGA GGTCCTTGCC GAACGGTTCC CGCAAGTCTC CGGGGCAAGT GGCCAGCTAC TCCTGCAAGC CCCTGATGGC GCCGACATTC GGGACTACCG CACCGACATT GAGCAGATCG TCGCGGACGG TAACGCCATC GAGGACGTCG CCATTGTGTC CAACCCGTTT GAGGAGGGTG GCGCATCGTC GTTCTCCCCT GACGGAGAGA ACGTCTTGCT GCAAATCCAG CTTGATGTGC AGTTGGGCAG TATTTCCGAT GCGACCCTTG ACGGGTTCCG TGACCTTGCC GACGACGTCA CTGCGTCCAC TGACCTCACG GCTCATGTGG GTGGCGGCAT GTTCCAGATG ACCTCGGTGC ATTTCTCGAT TGCTGAGGTG TTGGGGGTTG GGGTCGCACT CATTGTCTTG GCGATCACTT TTGGGTCGTT GATTGCTGCG GGTATTCCGA TCGTCACCGC GATCATTGGT GTGGCGGTGT CGATGTTGCT TGTTATCACC GCTGGAGCTT TCACGGATAT TTCTTCCACG ACTCCCACGT TGGCGATCAT GCTTGGGTTG GCTGTGGGCA TCGACTATGC GTTGTTCATT ATTTCCCGGC ACCGATCCCA GTTGGCCGAC GGGCTGGATG TCACAGAGTC CATCGCGCGG GCTGGTGCGA CTGCAGGGTC AGCGGTGATC TTCGCCGGGA TGACGGTCAT TATTGCTTTG TGTGGGTTGG GGGTTGCCGG GATTCCGTTC CTCACGGTCA TGGGTCTTGC TGCGGCTGCG GCTGTGGCGA TCGCTGTGTT GATCGCGATC ACGCTCCTTC CCGCAGTCTT AGCTTTACTT GGTGAGAAGC TTCGACCACG GCGCCGCCAC ACCCCCGGCG AGGCGAAACC CACTGCCCGG TGGGTAAAGA TCACGACCAG TCACCCGTGG TGGACGCTTG TAGCGTGTGT GGTGTTGCTT GGCGTTGCCG CTATTCCGGC AAAAGACCTG ACCTTGGCGT TGACGGATAA CGGTTCGCAG CCGGTGGGCA CCGATGTGCG GGACACCTAC GACCTCGTTG CCGATGCGTA CGGGGAAGGT TTTAACGCTC CGATTCTTGT GACCGCTGAC ATTATTGCCT CCGATGATCC GCTGGGGGTT GTTCAGGCAT TGTCTGATGA CATCGAGGCT ATTGACGGGG TGGCGTCGAT TGGAATTGCC ACCCCGAATA TGACAGCCGA CTTGGGCATG GTTCAGTTGG TGCCCCAGTG GGGGCAAACA GACCCACGAA CCGCTGAGTT GGTCCACGAT ATTCGTGAGC AGGCTGACCG GTGGGAAGAG GACCTGGGCA TTGACAATGT CACGGTGACT GGGCAGGTCG CAGCAGGTAT TGATATTTCG GAGAAGTTGT CCAACGCACT GTTGCCGTTT GGGGCGGTTG TGGTGGGCCT GTCACTGGTA CTGCTCTTGG TGGTCTTCCG CTCGATTGCG GTACCAATCA AGGCAACACT GGGCTACTTG TTGTCGATTC TTGCCTCGTT TGGGTTGACG TGGGCTGTGT TTGGGTGGGG CTGGGCGGCT GCCGCTCTCA ACGTGGATAC CACCGGCCCG ATCATTTCGT TCATGCCGAT CATTGTGATG GGTGTGTTGT TCGGTTTGGC CATGGACTAT GAGGTGTTCT TGGTGTCGCG TATTCGCGAG GAATACGTGC ACACAGGCGA TGCGCGTGGC GCGATCCTCA CCGGATACAC CGAGTCGGCG CGCGTGGTAT CAGCGGCGGC AATCATCATG ATCGCTGTGT TTGGGTCGTT TGTTCCCATG GGGGATGCGA TCATCAAACC GATTGCGTTT TCGTTGGCAG TTGGGGTTTT CATTGACGCG TTTCTTGTGC GCATGACCCT GGTTCCAGCA GTGTTGGCGA TCCTTGGAGA TCGGGCGTGG GCGCTGCCCC GCTGGTTGGA ACGCACCATG CCGCACTTGG ATGTGGAAGG AACAGGACTG GAGAAGCGGC TCGCTCAGCA AGAATGGGCC GCCCACAACC CGGGTGTCGC TGTCCGCGTG GAGAACATGG TGCTGCATGA CACCCGCGAC CACGCGCTCG TGTCAGGGTT GTCGCTCACC GCAACAACCG GTGATGTTCT TCTTGTTCGG TCCACCGACA CGTTGGCCCG CCAAGCAACC CTGGCTGCGG TCACCGGGCG GCACCGCATC GAATCCGGTG TGGTCACTAT TGCTGACTGT GTCCAACCCG AGGAACGGAA CCGGTTGCGA CGCCGCTCAG CGTTCACGGT GAACACTGTC ACCCTGTCCA CACTGTCCGC CTGGGTGGAA TCGGTCCTCA CCGACCGTCA TGGCGCTCAT GTGGTGGCTG TTGACACCGC CGACCTGTTG ATAGCGCCAG GGTCCGGGGG TCGGGTGGAT GCGGCAACTC TCGATGCGCT GTGTGAGGTG CTTGCACCGT TGCACGCTGA AGGGATTGTC ACGTTTGTGG GAACAGCAGC AGACGCGGAC CCTGCTGTGG TCGTCACCGC GTTGACCTCT CGTATTCTTC CTTCGTCTTC TGTCCCGGCT CACGCCACCC CTATTGAGGA GTCACTGTGA
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Protein sequence | MSTALYNLGR YLSRHKIATV LTWLMIIVLS VAAAVLSGGK FNDNLSIPGT EAQEGLEVLA ERFPQVSGAS GQLLLQAPDG ADIRDYRTDI EQIVADGNAI EDVAIVSNPF EEGGASSFSP DGENVLLQIQ LDVQLGSISD ATLDGFRDLA DDVTASTDLT AHVGGGMFQM TSVHFSIAEV LGVGVALIVL AITFGSLIAA GIPIVTAIIG VAVSMLLVIT AGAFTDISST TPTLAIMLGL AVGIDYALFI ISRHRSQLAD GLDVTESIAR AGATAGSAVI FAGMTVIIAL CGLGVAGIPF LTVMGLAAAA AVAIAVLIAI TLLPAVLALL GEKLRPRRRH TPGEAKPTAR WVKITTSHPW WTLVACVVLL GVAAIPAKDL TLALTDNGSQ PVGTDVRDTY DLVADAYGEG FNAPILVTAD IIASDDPLGV VQALSDDIEA IDGVASIGIA TPNMTADLGM VQLVPQWGQT DPRTAELVHD IREQADRWEE DLGIDNVTVT GQVAAGIDIS EKLSNALLPF GAVVVGLSLV LLLVVFRSIA VPIKATLGYL LSILASFGLT WAVFGWGWAA AALNVDTTGP IISFMPIIVM GVLFGLAMDY EVFLVSRIRE EYVHTGDARG AILTGYTESA RVVSAAAIIM IAVFGSFVPM GDAIIKPIAF SLAVGVFIDA FLVRMTLVPA VLAILGDRAW ALPRWLERTM PHLDVEGTGL EKRLAQQEWA AHNPGVAVRV ENMVLHDTRD HALVSGLSLT ATTGDVLLVR STDTLARQAT LAAVTGRHRI ESGVVTIADC VQPEERNRLR RRSAFTVNTV TLSTLSAWVE SVLTDRHGAH VVAVDTADLL IAPGSGGRVD AATLDALCEV LAPLHAEGIV TFVGTAADAD PAVVVTALTS RILPSSSVPA HATPIEESL
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