Gene Jden_0438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0438 
Symbol 
ID8379624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp463576 
End bp464508 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content60% 
IMG OID645003171 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003160406 
Protein GI256831679 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.207857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCACTA CACTCAGTGG GGTGAACCGC GACTATAGTG ACGTGATTAT TGACGGTCCC 
TGGGACCATG AGTTCGTTTC CGCACATGGG GCACGCTTCC ATGTGGTCAC CGCTGGGATG
GCAAACAGCG GTCCGCTGAT CACACTTGTC CACACCACAC CGTTGATGTG GTGGCAATGG
CGGCACACGA TCCCCGCACT TGCCGACGCT GGCTGGCGGG TCGCTGCCCT CGACATGCGT
GGAACCGGCG CCTCGGATAA GCCACCAACA GGGTATGACC AAATCACCCG AACCCGTGAC
GTTGCCGGTG TGATTCGTTC CTTAGGTGCC AGTAAAGCCA TTGTTGTGGG ACACGGACTC
GGAGCAGTCA CGGCCTGGTC GATGCCGTCA CTCCAACCAG CCATCACCGT CGGAGTTGCG
GCACTGAGTG CACCACATCC CGCCCGCCTT CACGCATCAC TGCGCACCTC CCTGAATAAA
CTGCCCTGGC GGCGTCTGCC GGCCCTCCAC CTTCCCTCTC TCGGTGAGCG CACTCTCACC
CGCCCAGAAA CCATGTCACG CCTGTTCACA AGGTTTGGCC ATCAGCCAGT GCCCGGCCAG
GTCATCGACA CGTACGCCAA TGCCCTGCGC ATCCCGTTCG CAGCTCACAA CTCCCTGGAA
CCATTACGCT GGTACACCAA AGGCATCGCC GGACCTGTGG GACGCCGCTA CCTTCAAGGG
GTACGGACAG GTATCACCGT GCCTGCCCTC CAACTGCAAG GTGCACACGA CGGGCTCCTG
CGCCGCGAAC TCATTGCTGC TGATTCCTCA GCCCTGTGCT CCAACTTACG GTTCGAAACC
ATCTCTGACG CCGGATTCTT CCTCACAGAA GAAGTACCCA ACACTGTGAA CGACTTACTT
ATCGACTGGT TGAGTAAGTC GTTCCCGCAA TGA
 
Protein sequence
MVTTLSGVNR DYSDVIIDGP WDHEFVSAHG ARFHVVTAGM ANSGPLITLV HTTPLMWWQW 
RHTIPALADA GWRVAALDMR GTGASDKPPT GYDQITRTRD VAGVIRSLGA SKAIVVGHGL
GAVTAWSMPS LQPAITVGVA ALSAPHPARL HASLRTSLNK LPWRRLPALH LPSLGERTLT
RPETMSRLFT RFGHQPVPGQ VIDTYANALR IPFAAHNSLE PLRWYTKGIA GPVGRRYLQG
VRTGITVPAL QLQGAHDGLL RRELIAADSS ALCSNLRFET ISDAGFFLTE EVPNTVNDLL
IDWLSKSFPQ