| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0310 |
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| Symbol | |
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| ID | 8379503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | - |
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| Start bp | 329533 |
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| End bp | 330855 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645003046 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003160285 |
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| Protein GI | 256831558 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0877495 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.113221 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGGAC TAACAAAAAC CGCAGCAGCA GCACTCGCCG TCACACTAGG GGTCACCCTC
GCCGCATGCG GCTCCGACGA CGACACCACG AACAACTCAG CAAAGCCAGG CGAAAAAGTA
GAACTCACCT ACTGGACCTG GGCACCCAAC ATGGAAAAAG TTGTTGACGT GTGGAACGCC
GAGAACCCAG ACATCCAGGT CACGGTCAAC AAGCAAGACG GCGGCGACGC AGCCGTCACC
AAGTTCCTCA CCGCCATCAA AGCAGGCTCT GGGGCTCCAG ACCTCATGCA AGCCGAATAC
CAAGTCATCC CCACCCTCGT CTCCTCAGAC GCACTCGCCG ACATTTCCGG CTACATCGAT
GAGACCACCC GCGAAGAATT CTCCGACGGT GTCTGGAACG CGGTCACACT CGGTAGCGAC
GCCGTCTACT CCGTGCCCCA AGACTCCGGC CCCATGATGT TCTTCTACCG GGCAGACGTC
TTCGAGGACC TTGGCATTGA GGTCCCCACC ACCTGGGACG AATACGCTGA CGCGGCACGT
ACCATCAACG AAGCAGACCC CGACGTCTAC CTCGGCACGT TCTCCGCCAA CGACGCAGGC
TGGTTCACCG GCCTTGCCAC CCAAGCCGGT GCCTCCTGGT GGTCCATGGA CCTGGAAGCA
CAAGCATGGG GCGTGCACAT CGATGAAGAA CCCACCCAGA AAGTCGCCAA GTTCTGGGGT
GAACTCGTCG AAGAAGGCGT CATCAACAAC AAACCCATGT ACACCCCCGA ATGGAACGCC
GCACTCAACA ACGGCACCGA GGTCGGCTGG CTCTCCGCCG TGTGGGCACC TGGAGTCCTC
GCCGGAAACG CCGGCGACAC CGCAGGCAAA TGGAAAGTCG CACCCATGCC ACAGTGGGAC
GCCAACGCAC CCGCCACCGG CAGCTGGGGT GGATCCTCCA CAGCCGTGTC CACCCAAAGT
GAGCACCCTG AAGCAGCAGC GAAGTTCGCA ACCTGGCTGA ACACCAACGA AGACGCCGTT
GCCGCAATGG TCAAAGAAGC AGGCATTTAC CCAGCCGCGC AAACCGCAGC CCTCAGCGCT
CTCAACGAAG CACCTGAGTT CTTCTCCAAC CAGCCTGAGT TCTACGATGT TACTGCTGAG
GTTGCTCAAA CCGCTGCGCC CTTCACCTTC GGACCCAACG TCAACACCGC CTACTCGGCC
TACAACGACG AATTTGGGAA AGCCACCGAA TCCAAGAAAG CAGCAGACTT CGTCAACGCT
GTCACCGCAA TCCAGACCAT CACCACCGAA GACATGGTGA ACGCTGGCTT CACTGTGAAG
TAA
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| Protein sequence | MRGLTKTAAA ALAVTLGVTL AACGSDDDTT NNSAKPGEKV ELTYWTWAPN MEKVVDVWNA
ENPDIQVTVN KQDGGDAAVT KFLTAIKAGS GAPDLMQAEY QVIPTLVSSD ALADISGYID
ETTREEFSDG VWNAVTLGSD AVYSVPQDSG PMMFFYRADV FEDLGIEVPT TWDEYADAAR
TINEADPDVY LGTFSANDAG WFTGLATQAG ASWWSMDLEA QAWGVHIDEE PTQKVAKFWG
ELVEEGVINN KPMYTPEWNA ALNNGTEVGW LSAVWAPGVL AGNAGDTAGK WKVAPMPQWD
ANAPATGSWG GSSTAVSTQS EHPEAAAKFA TWLNTNEDAV AAMVKEAGIY PAAQTAALSA
LNEAPEFFSN QPEFYDVTAE VAQTAAPFTF GPNVNTAYSA YNDEFGKATE SKKAADFVNA
VTAIQTITTE DMVNAGFTVK
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