Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jden_0265 |
Symbol | |
ID | 8379460 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jonesia denitrificans DSM 20603 |
Kingdom | Bacteria |
Replicon accession | NC_013174 |
Strand | + |
Start bp | 282648 |
End bp | 283928 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 645002999 |
Product | seryl-tRNA synthetase |
Protein accession | YP_003160242 |
Protein GI | 256831515 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.540225 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.498344 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGATTGATC TACGCACCCT CCGCGAGAAC CCAGACCTTG TCCGACAAAG CCAAATTGCC CGGGGTGACG ACCCCGGAAT CGTCGACACC ATCCTCGAAG CCGACGTGCG CCGACGCACC GCGTTGTCCG AGTTTGAAGC CCTTCGGGCA CGGCAAAAGA GCATCGGGAA GGACGTGGCG CGCGCATCGG GAAGCGAGAA AGACGCACTC CTCACGGAAA CAAAACAGAT CGCCGCAAAG GTCAAAGAAC TCAACCAGGT GCAGCAAGAC GCCAACGAGG AACTCAACAC ATTGTTGCTC CAGGTGGCCA ACATCGTTGA GGGCGCCCCT GTTGGTGGCG AGGAGGACTA CATTGTCCTG CGCCACGAAG GGCAACCCCG CGACTTCACC GCCGAAGGCA TGTCACCCAA AGACCACCTT GCTATCGGTG AAGGGTTGCG CGCTATTGAC ACGGAGCGCG GTGCAAAAGT GTCCGGTTCG CGGTTTTACT ACCTCACCGG CATTGGTGCC CGCCTCGAAC TGGCCTTGCT CAACGCGGCC GTTGACCAAG CAGTTGCCGC CGGGTTTACA CCCATGATTA CCCCCACAAT TGTGAACCCT GACGTCATGC GTGGCACCGG GTTCCTTGGG GCCCATGCCG ACGAAATCTA CTACCTCGGT GCTGATGATC AATACCTTGT TGGGACCTCG GAAGTTGCAC TCGCCGGGTA TCACTCCAAG GAAATTGTTG ACCTATCCAA CGGTCCACTG CGGTACGCCG GGTGGAGCGC CTGCTACCGG CGTGAAGCCG GATCACACGG TAAAGATGTG CGTGGCATCA TCCGTGTGCA CCAGTTCCAC AAGGTAGAAA TGTTCTCCTA CTGCACCCCG GCTGACGCTG AGGCGGAACA TGCGCGCCTG CTTGCCTGGG AAGAGGAGAT GCTCAAAAAA TGCGAGCTAC CCTACCGTGT TATTGACACC GCAGCCGGGG ACCTGGGGTC CTCTGCCGCA CGCAAGTTTG ACTGTGAAGC CTGGCTCCCC AGCCAAGAGC GCTACCTTGA ACTCACCTCA ACCTCGAACT GCACAACGTT CCAAGCCCGC CGGTTGGGTG TGCGCGAACG TGTCGAGGTT GATGGAAAAT CTGAAACCCA AACCGTGGCT ACCCTCAACG GAACGCTTGC CACCACCCGG TGGATCGTCG CCTTGCTAGA AAACCACCAA CAAGCTGACG GATCCGTGTA TGTACCGGTT GCGTTGCGCC CATACCTTGG TGGACTTGAG GTGCTGGAGC CCAGCGCGTG A
|
Protein sequence | MIDLRTLREN PDLVRQSQIA RGDDPGIVDT ILEADVRRRT ALSEFEALRA RQKSIGKDVA RASGSEKDAL LTETKQIAAK VKELNQVQQD ANEELNTLLL QVANIVEGAP VGGEEDYIVL RHEGQPRDFT AEGMSPKDHL AIGEGLRAID TERGAKVSGS RFYYLTGIGA RLELALLNAA VDQAVAAGFT PMITPTIVNP DVMRGTGFLG AHADEIYYLG ADDQYLVGTS EVALAGYHSK EIVDLSNGPL RYAGWSACYR REAGSHGKDV RGIIRVHQFH KVEMFSYCTP ADAEAEHARL LAWEEEMLKK CELPYRVIDT AAGDLGSSAA RKFDCEAWLP SQERYLELTS TSNCTTFQAR RLGVRERVEV DGKSETQTVA TLNGTLATTR WIVALLENHQ QADGSVYVPV ALRPYLGGLE VLEPSA
|
| |