| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0134 |
|---|
| Symbol | |
|---|
| ID | 8379330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jonesia denitrificans DSM 20603 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013174 |
|---|
| Strand | + |
|---|
| Start bp | 148104 |
|---|
| End bp | 148871 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645002868 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_003160112 |
|---|
| Protein GI | 256831385 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACC ACACCACCCA CACAACAGAC CCCGCAATCA CCCTGTCCCA CCTGACTCAG
GGCTACCGGC GAACAACCGT GATTGACAAC CTCACCTGCG AGATCCCACC AGCCCGAATC
ATTGGGCTAC TCGGACCCAA CGGGGCAGGG AAGACAACAC TGATCCGCAC CCTCGCCACC
ATACTCCCCC CGAGATCAGG GACCATCACT GTCTTCGGAA CCCCAACAAC CGGAAGGGTG
AACCTGGCAG CGGTGCGTTC CCAACTGGGG TATCTTCCAC AACACGTCAC CGCCGACCCA
ACCCTCACCG TGCGCGACTA CGTGGAATAC TGCCTGTGGA TGCGCACTAT CCCCACAGCA
GACATTGCCC GGTACGCACA CGACGCCATC ACCGCGGTCA ACCTCACAGA CTCAGCCAGA
ACGCGCATCG GCAAACTCTC CGGGGGAATG CGCCAACGAG CCGCTATCGC CGCCGCGACC
GCTGGGAACC CTCGATTCAT CCTCCTTGAC GAACCCACCG CTGGACTCGA CCCGGCACAA
CGTGCTGAGT TCCGCGCCTA CCTCACAACC CTCACCGCAT CAACCATCAT CATCTCCACC
CACCTCATAG AAGATGTCAT GGCGTCCGCC GACCACCTCC TTGTGATGAA CAACGGGAGA
ATCACCTACA ACGGGGCCCC CGACGTTCTC GCCCCCGACC CCAATGACCG CTCACTGACC
ACCCTCGAAG CGCACTACCT CACCCTGCTG GAAGCCTCCA CAGCGTGA
|
|---|
| Protein sequence | MTDHTTHTTD PAITLSHLTQ GYRRTTVIDN LTCEIPPARI IGLLGPNGAG KTTLIRTLAT
ILPPRSGTIT VFGTPTTGRV NLAAVRSQLG YLPQHVTADP TLTVRDYVEY CLWMRTIPTA
DIARYAHDAI TAVNLTDSAR TRIGKLSGGM RQRAAIAAAT AGNPRFILLD EPTAGLDPAQ
RAEFRAYLTT LTASTIIIST HLIEDVMASA DHLLVMNNGR ITYNGAPDVL APDPNDRSLT
TLEAHYLTLL EASTA
|
|---|
| |