Gene Jden_0114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJden_0114 
Symbol 
ID8379310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJonesia denitrificans DSM 20603 
KingdomBacteria 
Replicon accessionNC_013174 
Strand
Start bp126686 
End bp127732 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content59% 
IMG OID645002848 
ProductAlcohol dehydrogenase GroES domain protein 
Protein accessionYP_003160092 
Protein GI256831365 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.537568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0906479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAACCA TTCCTGCATA CGTTGCCCAC TCCGCAACGG ATCCGCTGAC CCCAGGCACA 
ATCGAACGGC GCAATGTCGG GCCGCACGAT GTGCGCATCG ACATTCAGTG GGCGGGTATT
TGCCACTCAG ATATTCACAC GGTGCGAGGA GACTGGGGGC CGCAGCCCTA CCCCTTAACT
GTTGGCCACG AAATCGCTGG CGTCGTTGTC GACGTGGGTG GGTCGGTGAC TCGGCACAAG
GTTGGTGACC GGGTTGGTGT GGGATGCATG GTCAACTCCT GTGGGTCGTG CGTCAATTGT
GAGGCGGGCG ACGAACAATA CTGTGTCAAG GGAATGGTGG GCACCTACGG CGCTACCGAC
GTCGATGGCA CGATCACTCA AGGTGGGTAC GCCACCGAAA TTGTTGTGAC AGAGAAATTT
GTGTTGTCTA TCCCAGATGC GATCCCGTTT GAGAAAGCAG CACCGTTGCT GTGCGCGGGC
ATCACCACCT ACTCTCCCCT GCGGCACTGG GGCGCTGGCC CAGGGAAACA GGTGGCAGTT
GTGGGCCTGG GCGGGTTGGG GCATATGGCC GTGAAGTTTG CTGTGGCGAT GGGAGCTGAG
GTCACCGTCA TTTCCCGCAC GTTGTCAAAG AAAGCTGATG GCCTGCGTCT CGGCGCATCG
CATTACGACC AAACAAGTGA CCCCGACATG TTCTCTCGGC TCGCTGGGTC CTTTGACCTC
ATCATCAACA CGGTGAGTGC GCCATTCGAT GTCGATGCTT TCCTTGGCTT GCTGGCGGTC
AACGGCGCCC TTGTGAACGT GGGCGCACCT GCGGAACCGT TGTCTGTGCG CGCTGGGAAC
CTTATTGGTG GCCGCCGCAC GTTCGCTGGT TCCATGATTG GTGGTATCGC GCAAACCCAA
GAAATGTTGG ACTACTGCGC GGAACAGGGC ATTGCCCCTG AGGTTGAAGT GGTGTCCGCT
GACCAGATTA ACGATGCGTG GGATCGGGTT CTCACCTCGG ACGTCCGCTA CCGCTTCGTG
ATCGACACCT CCACCCTGGT GAGCTGA
 
Protein sequence
MSTIPAYVAH SATDPLTPGT IERRNVGPHD VRIDIQWAGI CHSDIHTVRG DWGPQPYPLT 
VGHEIAGVVV DVGGSVTRHK VGDRVGVGCM VNSCGSCVNC EAGDEQYCVK GMVGTYGATD
VDGTITQGGY ATEIVVTEKF VLSIPDAIPF EKAAPLLCAG ITTYSPLRHW GAGPGKQVAV
VGLGGLGHMA VKFAVAMGAE VTVISRTLSK KADGLRLGAS HYDQTSDPDM FSRLAGSFDL
IINTVSAPFD VDAFLGLLAV NGALVNVGAP AEPLSVRAGN LIGGRRTFAG SMIGGIAQTQ
EMLDYCAEQG IAPEVEVVSA DQINDAWDRV LTSDVRYRFV IDTSTLVS