| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0062 |
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| Symbol | |
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| ID | 8379259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 68694 |
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| End bp | 71258 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645002797 |
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| Product | alpha-L-arabinofuranosidase B |
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| Protein accession | YP_003160041 |
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| Protein GI | 256831314 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.649597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.531326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGAAGA AACTACACAC CATGACACAA GGATGGAGGC GCCAAAAAAC TCACGCCTCA
CATCCACGAA AGGCACATCG AGGATCATCT ATTGGATCCT TCACGCTTGT GTGTGCACTG
CTGACCGGGG CGTTGACAAG TGTTCCAGCA GTATCAGCGG TGGCCGCCCA GGCGGCTACA
AGTCCTGGTG CCGGGCTGCT GGCCACGGCC GTGAACGACA CCTGCGTTTC GGGGACATGG
TCGACAGACC CAGCGGTCAA GATGTTCCCA GAGCAGCACA CCACGGAGCA CTTCTCATTC
CGGTGGAAGA GTTCCGAGGT CTCAAAAACT GATGTTCAGG CCGCCGGTAA AGCGTTGGAG
GAAATCTGGG CACAGTTCAT GGCGGAACCA ATTGCGTTCC CCGAACCGCA CTGTGATTCG
GCAACGAAAC GTCGCGTCAA CGTGGAAATT GATCCAAGTT ACGCGCTCAC CGGTGGCGTC
ACCTCTGAAG GTGCAATGGG CATGTGGATT GGGTCTGGGG CTCTCAAGGA CCGGTGGGGG
CTGGCACATG AGTTGACCCA CGCTTTACAG GGGTCAACCA AGGCTTTTCG TGATTCCCCT
TACGTTGGGT GGTTGTGGGA GTCGCACGCA AACTGGATGA CGCATCAGCT CCCGGAGTTC
CGCACGAACC CGCACTGCTC TGAGCTGTTC GCGAATCACA CAAGTCTCTA CTACGGTTCA
ACGCGAAATA ACTACTGCAA CTGGCAGTTT TGGGAGCATC TGAAAGTAAC CTATGGCTCA
GACACTGTTC AGGGTTTGTG GGCCAACGCC CCAAAGCAGG GTGCCGCAAA TTATCGTGAC
GCCGACCCAT TTTCCGTGCT GATGGAACAG CAGGGGTGGT CGCTGGAGCG TCTGAACGAT
GAGTTCGGTC TGTGGGCGAT GAAGAACGTC CTATGGGACT ACGGGACGAA CACGTACCGT
CAAGCGTATG GCGGGTATGA CAACCTCACC GGCGATCGCA CGTTACGTGT GACCCCTATG
ACCCCAGTTG AGGGGGTGAC GGGTCGGTAT GCGGTTCCGT TTGAGGCTGC TCCCCAACGG
TGGGGTTACA ACACGGTCCG GTTAACACCC GATTCGGGGG CCACATCGGT GACCGTGGGT
TTCCGTGGGA TTGTCCAAGA CACGGCAGCC ACCAGCACGC TGCCCGGGTT CGCGAACGAA
CCAGCCACCG TGGGGTCGCC TCATTCGGGG TGGCGTTGGG GTGTTGTGGT GGAGGGCGCT
GACGGGAAAG CCCGCTACAG CGAGTTACAG AAATCTGTGA GCGGAAGCGT GACTGTACCG
CTACGTTCAG GGGATCGTGG CGTGTACCTC ACTGTTCTTG CTGCTCCGAC CGCCCAGCAG
AAAATTGCTC ACAACCAGCC ATTTTATTCA ATTTACCGGT ACCCGTGGAC TATCGATGTG
GCGGGTGCGA AACCAACAGA GCCTACGAAA CCAGCAGGCA AGAAACACCC CAACGGTGGC
GGCTGGGTGG CCAACGGTGC GAATGTCGCG GCGACCGCGT TTGTTGGTCC GAACGCCTGC
GTGCTGGGTG GAACAGTGTC AGGGCAGGCA CGCATCGAAG ATCATGCCAC AGTGATGAGC
GGAACCGTGA CAGACAAAGC GATTGTGCGC GGGGTTTCTC TGATTCGTGG GCAAGCAACG
ATTAGTGGGA ACGCCGTGGT GAATACGACG TTCCGCGGTG TGGGGGCGTT CCAATCCCGA
ATCACAGTCT CTGGTAATGC GCAGATTCAC GGTGACAACG AACTGTGGCC CACCAGCATT
AACTCTGGTG TGTGGTATGG GTTCGTGGAT GACAACACAC TGTCCAGCCA CCCGATGCGT
CAGTTGTCGG CACCTGTCGC TGAGGTGACT CGGCGGCCGT CGACTGCTGA CCTGGCCGCG
GTAGCGCCCG CATCTACACC TGCGCCAACA ACCGAACCAA CGGGGGAAGC AACCACGGCT
CCAACAGCTG AACCGACTGT GGAACCCACA GCTGAACCGA CGGCGGAACC GAGTTCACCC
CCTGCCACCC CTGCACCGAA CCCTGCACCA ACGAATCCCA CCCCAACAAA CCCGGTCCCG
GCGCCTGTTC CGGTTCCGAG TCCGCAACCT GATGCGGGTG ACCCGGTTGT AGGTTCCACC
GTGACAGTGG CGTCGTACAA CTACCCGGAG CGAAGTGTGC GGCACCAACA TTATGTGGGC
CGTATCGACG CTACCCGTGA CAGCGAGGAC TGGCAGTGGA AGAAAGTGAC AGGTCTTGCT
CCAGGTGGGG GCGGTACGGT GTCGTTCGAG TCGGTGAACT TCCCTGGGTA CTTCTTAGTT
GCTGTGGGTC GCGACGTGAA GTTGCTCCGC AATGATGGGA CGACCGGGTT CGCGCGCTCA
GCAACGTTCA CGCAGGTCAA TGGGCTTGCC GATGCGTCAG CTCTGTCCTT TGAGTCCCTC
GCGGCACCTG GACGTTACCT TCGGCACTAC GGATTCCAAC TCTATGTTGA CCCAGTGTTT
ACGCCGGTTG CGCGGGCTGA TGCGACATGG CGGGTGATGA ATTAG
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| Protein sequence | MAKKLHTMTQ GWRRQKTHAS HPRKAHRGSS IGSFTLVCAL LTGALTSVPA VSAVAAQAAT
SPGAGLLATA VNDTCVSGTW STDPAVKMFP EQHTTEHFSF RWKSSEVSKT DVQAAGKALE
EIWAQFMAEP IAFPEPHCDS ATKRRVNVEI DPSYALTGGV TSEGAMGMWI GSGALKDRWG
LAHELTHALQ GSTKAFRDSP YVGWLWESHA NWMTHQLPEF RTNPHCSELF ANHTSLYYGS
TRNNYCNWQF WEHLKVTYGS DTVQGLWANA PKQGAANYRD ADPFSVLMEQ QGWSLERLND
EFGLWAMKNV LWDYGTNTYR QAYGGYDNLT GDRTLRVTPM TPVEGVTGRY AVPFEAAPQR
WGYNTVRLTP DSGATSVTVG FRGIVQDTAA TSTLPGFANE PATVGSPHSG WRWGVVVEGA
DGKARYSELQ KSVSGSVTVP LRSGDRGVYL TVLAAPTAQQ KIAHNQPFYS IYRYPWTIDV
AGAKPTEPTK PAGKKHPNGG GWVANGANVA ATAFVGPNAC VLGGTVSGQA RIEDHATVMS
GTVTDKAIVR GVSLIRGQAT ISGNAVVNTT FRGVGAFQSR ITVSGNAQIH GDNELWPTSI
NSGVWYGFVD DNTLSSHPMR QLSAPVAEVT RRPSTADLAA VAPASTPAPT TEPTGEATTA
PTAEPTVEPT AEPTAEPSSP PATPAPNPAP TNPTPTNPVP APVPVPSPQP DAGDPVVGST
VTVASYNYPE RSVRHQHYVG RIDATRDSED WQWKKVTGLA PGGGGTVSFE SVNFPGYFLV
AVGRDVKLLR NDGTTGFARS ATFTQVNGLA DASALSFESL AAPGRYLRHY GFQLYVDPVF
TPVARADATW RVMN
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