| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jden_0002 |
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| Symbol | |
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| ID | 8379202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jonesia denitrificans DSM 20603 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013174 |
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| Strand | + |
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| Start bp | 2173 |
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| End bp | 3303 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645002737 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003159984 |
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| Protein GI | 256831257 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000000849521 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.168185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCC GGGTTGAACG TGATGTCCTC ACAGAGGCCG TCACATGGAC TGCTCGTACT
TTGCCAGCTC GTCCACCGGC TCCTGTGCTC TCGGGTGTGC GTATTGAAGC GACACAAGAA
GGCGTTGTGA AGCTCGCATC GTTCGACTAC GAAGTGTCCG CACGAGGGGA AATCCCCGCT
GAGGTGACAG AACCAGGGAC CATTCTTGTC TCTGGACGTC TATTGGCTGA GATCGCAAAA
GCACTCCCCC ACAAACCAGT TGACTTTACG GTGGACGGAA CAAAAGTTTC CGTGGTGTGT
GGCGCATCGC GGTTCTCACT ATTGACGATG CCCGTCGAGG AATACCCCAC ACTTCCCACA
ATGCCAGAAC TCACAGGCGT GGTGGATGGA AGCGAACTCA GTGCCGCTGT GTCACAGGTG
ACTGTCGCAG CGAGCCGTGA TGACACACTT CCACTGCTCA CAGGAGTACG TATTGAAATT
GAGGGTGAAA AGGTCACGCT TCTTGCGACA GACCGCTACC GCCTTGCGTT AAGGGAAATG
ACGTGGCGTC CGAGCGCCCC TGATATGTCA ACTGTGGCTT TGGTACGTGC ACGCACTCTC
AACGACGTTT CAAAGTCGCT TGGCCCTGTG GGTGACGTCA ATGTTGCATT GTCAGTTGGT
GAAGGCGTTG ACCTTATCGG GTTTGAGGCT GGTGGCCGTC AAACCACATC ATTGCTGGTT
GATGGTGACT ACCCGCATGT GCGTAGGCTC TTTCCTGACG AGACCCCTAT TCACGCAGTC
GTGGCAACAC AACCGCTCAT CGACGCTGCG CGACGTGTGG CGTTGGTTGC TGAACGCAAT
ACCCCAATCC GTTTGAACTT CTCCGAAGGG CAAGTTGTCC TTGACGCTGG CCAAGGAGAC
GATGCACAAG CGTCAGAGGT TCTTGAATCC ACTTTGGTGG GTGAGGATAT TTCCGTTGCA
TTCAATCCAC AGTTCCTCCT TGATGGGCTC AATGCTTTGG GAACTGACTT TGTCCGTTTG
TCCTTCACGC ATCCGAACAA ACCCGTCGAG TTCACCGGTC AAGAGTCGCT CGATGGTGAA
GATTCCAAGC ACTACCGCTA TCTTCTCGTC CCTATTCGCT TCGCGAATTA A
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| Protein sequence | MKFRVERDVL TEAVTWTART LPARPPAPVL SGVRIEATQE GVVKLASFDY EVSARGEIPA
EVTEPGTILV SGRLLAEIAK ALPHKPVDFT VDGTKVSVVC GASRFSLLTM PVEEYPTLPT
MPELTGVVDG SELSAAVSQV TVAASRDDTL PLLTGVRIEI EGEKVTLLAT DRYRLALREM
TWRPSAPDMS TVALVRARTL NDVSKSLGPV GDVNVALSVG EGVDLIGFEA GGRQTTSLLV
DGDYPHVRRL FPDETPIHAV VATQPLIDAA RRVALVAERN TPIRLNFSEG QVVLDAGQGD
DAQASEVLES TLVGEDISVA FNPQFLLDGL NALGTDFVRL SFTHPNKPVE FTGQESLDGE
DSKHYRYLLV PIRFAN
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