Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_4090 |
Symbol | |
ID | 3936579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 4196676 |
End bp | 4197998 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637906476 |
Product | twin-arginine translocation pathway signal |
Protein accession | YP_512032 |
Protein GI | 89056581 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.25614 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATAGAC GGACATTCCT CACGACGGTA TCAGCGGCAG CGATGGTCGC GGCAGCGCCC AAACTGGCGC TCGCGCAGGA GCTTGCTTAC GGCCTGACCC CCGGACGCCC CTTTGAAGGC ACGACAATCA ACGTCCTTTC CGTGGTGACA CCGCAATTCG ATGGCCTCCG CCTGCGCGAT CAGGAATTCA CGGATCTGAC CGGCATCAAC GTGGAATGGA CGTTCATTCC CTTTGGCTCT CTTCAGGAAC GGGTGAACGC AGAAGGCATC GCGGCCAACG GCGCGTTCGA CGTGGTGAAC TACCTCGACA GCTGGGGCCC GCCCAACGCC CATTGGCTCA CGCGCATCGA CGACCTGATG GCGCGCGACG GCATCTCGAT GGATCGCTAT CCGCCAGCCT TTGCGCGCTC GGCCCAATTC GAAGGCGAGA CGCTCGGCTT CCCCCTGCGT GCCCACGCTC AGCTGATGTT CTACCGCAAG GACCTGATCG AGACGCCGCC CGCTACGTGG GACGACGTCG TGCGCATCGG TGGCGAACTG GCCGAGAGCC ATCCGGATAT CGCGCCCCTC GCGCTTTATT ACAACAACGA CGGCAACCGG CAGAACCTGT TCATCTGGAT CAACTTCCTC TGGGCCGCCG GTGGCGCGAT CTTCAACGAC GATTTCACCG CCGCGTGGAC GTCGGATGAG GCCATCGCCG CTACCGAGGC CTATATCGGC CTGCACACGG AAGCGGGCGT CACCAACCCC AACTCCCTGG CCTTCGTGGA ACAAGACGCG CGGCAGTCGT TCATGCAGGG CAATTCGGCC ATGATCCCGG TGTGGTGGTG GGCCTATTCG GGCTTCATCA ACCCCGAAAG CTCGACCCTC ACAGCCGATC AGGTGGGTTT CGTGGGCATG CCGTCCTATG AGGGCACGAC CGCGACCTAC GCGATCTCCA TGCCGTTCTC GATCTCGACC TACTCGGCAA ATCAGGAAGC GGCTTGGGAA TTCCTCAAGT GGCTGTCGAA CCCCGACATG GACCGCGCCA ATGCGATCGA GCGGGACGTG GGTGGCGAGA GCATCGTCAA CAACGTGGTG ACGCATGTGT CCTCGCTGAC GGACCCGGAC GTGAACGCGG CCAATGCGGG CATTCAGGCG GCCGCTTATG ACAGTCTGGC GAATTCCGAC ATCATGCCGC AAATTCCCGA GTGGCCCGAG GTCGGTGACA TCCTGTCCGC CGCCATCGCG GAGGCCGCCG CAGGTGGCAA CGTCCGCGAG CTGATGATGG CCGCCGCAGA GCAATCCGAC CGCGTGCTGC GCCGCGCCGG TCGTATCGAG TAA
|
Protein sequence | MHRRTFLTTV SAAAMVAAAP KLALAQELAY GLTPGRPFEG TTINVLSVVT PQFDGLRLRD QEFTDLTGIN VEWTFIPFGS LQERVNAEGI AANGAFDVVN YLDSWGPPNA HWLTRIDDLM ARDGISMDRY PPAFARSAQF EGETLGFPLR AHAQLMFYRK DLIETPPATW DDVVRIGGEL AESHPDIAPL ALYYNNDGNR QNLFIWINFL WAAGGAIFND DFTAAWTSDE AIAATEAYIG LHTEAGVTNP NSLAFVEQDA RQSFMQGNSA MIPVWWWAYS GFINPESSTL TADQVGFVGM PSYEGTTATY AISMPFSIST YSANQEAAWE FLKWLSNPDM DRANAIERDV GGESIVNNVV THVSSLTDPD VNAANAGIQA AAYDSLANSD IMPQIPEWPE VGDILSAAIA EAAAGGNVRE LMMAAAEQSD RVLRRAGRIE
|
| |