Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3788 |
Symbol | |
ID | 3936268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3872179 |
End bp | 3872895 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637906166 |
Product | GntR family transcriptional regulator |
Protein accession | YP_511730 |
Protein GI | 89056279 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATTCCA ACTCTCAACA TCTGCAATCC GTGGTTCGCC GCCAGATCGT ATCCGGCGGG CGAGAGCCGG GCTCCCGTAT CAACGAGGTT GCACTTGCCG CAGAATTCGA AGTCTCGCGC ACACCGGCCC GCACCGCGCT GGCCGGGTTG GAGGCCGAGG GGTTGATCGA AAAGCGCGAA GGGCGCGGAT ATACCGTGTG TTCGATTTCC AGGGCGGACG TGTCCAACGC GATCGCCGTG CGCGCGACGC TTGAGGCGCT GGCCGCTAAG ACGATGGCCG AAACCGGCTT GACGCCGGAG GTCGAGGCGA CGCTCTTGTC CTCCATCGCG ACGACCGAGG CGATCCTGGA GTCCGATACC CCGGTCAAGG AACTGCTCGA TGGCTACCAC GCCGCGAATG TCATCTTTCA TGAGACCATC ATGCAAAAGT GCGGCAATGA TCTGATCGCC CATACGTTTG AACGTATCGC CATGCTGCCC TTGGCCAAAC TGGGATCCCT GGTGTTTGAC CGGGGGGCGC CACAGCGCGA ACGGATGCGA CTAACGGTTG GCCATTCGCA GCACGTGATT TTGTTCGACG CGATCAAGCA GCGCGATGGG GCGCGGGCCG AAGCCATGAT GCGTGAACAC AGCCATGCGA CGCTTAACTA CGCGGACCTT TTTCTGCGCA AGACCTATGG CATCGCCACG ATGCGGACCG ATGAGATGGA GGTATGA
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Protein sequence | MHSNSQHLQS VVRRQIVSGG REPGSRINEV ALAAEFEVSR TPARTALAGL EAEGLIEKRE GRGYTVCSIS RADVSNAIAV RATLEALAAK TMAETGLTPE VEATLLSSIA TTEAILESDT PVKELLDGYH AANVIFHETI MQKCGNDLIA HTFERIAMLP LAKLGSLVFD RGAPQRERMR LTVGHSQHVI LFDAIKQRDG ARAEAMMREH SHATLNYADL FLRKTYGIAT MRTDEMEV
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