Gene Jann_3784 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3784 
Symbol 
ID3936264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3868411 
End bp3869394 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content62% 
IMG OID637906162 
Producthypothetical protein 
Protein accessionYP_511726 
Protein GI89056275 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAGTAC GCACCCTCGT TTCCGCCAAA ATGGCGTTCG CAACGGCCGC AACGGCCTTC 
ATGCTATCCG CCGCCCCGCA GATGGCCCAG GCCGATGAAT GCATCGCGCC GTCCAACCCC
GGCGGCGGGT GGGATTTCAC CTGCCGTACC ATCGGGCGCA TCCTGTCCGA GTTGAATCTA
GTCGATGGCA ACGTTCAGAT CACCAACATG CCCGGCGGTG TCGGTGCGGT GACCTACGCG
ATGGTGGACG CGGAACGCTC TGACGACGCA TCTCTGTTTG TTGCCACATC GACGGTCGGC
GTCACGCAGA TTGCCCAGGG GCGCTACCCG TCGGGAATCG ACACGATGCG CTACCTTGGA
ATGTTGGGCG CGGATGTGGG CGTGATCGCC GTGGCCGCCG ACAGTGAATT TGAAAGCCTT
GCGCAGTTGA ACGAGGCGAT TGTCGCCGAC CCGTCGTCGG TCGTGACCGC AGGATCATCG
GGCGCGGGTG GATGGGACCA TATTCGTTTG CTTATGGTTG CGCGCGAAGG CGGTCTGGAA
GACCTGCCCG CCCTGCGTTG GGTGCAATTC GACGGTGGCA CCGATGCGGT TACGCAGATG
ATGGGCGGGC AGCTTGATGT CGTGTCCACG GACCTTGGTG AGATTGCGGG TTTTGTGGAA
TCCGGTGACA TTCGCATCCT TGCGGCGCTC TCCAGCGACC CGATCCCCGC CTTCCCCGAG
ATCCCGACGG CGATCAGTCA GGGCATCGAC GTGACGGGGT ACAACTGGCG TGGCCTCTAC
ACCGGCGGCG ACGTCTCAGA CGAAGACTAC AACGCCCGCG TCACCCAGTT GGAGACACTT
TACAACTCCG ACGAATGGCA GACGGCCGCC GTGGAATTCG GCCTTGTGCC GATCTGGCGT
GGTGGAGCCG AGTTTGAGGC CTACGTCCGC GAACAAGAAC AGGTCATGGC CGAAATTTCG
CGCGACATCG GCGTGATTGA ATGA
 
Protein sequence
MGVRTLVSAK MAFATAATAF MLSAAPQMAQ ADECIAPSNP GGGWDFTCRT IGRILSELNL 
VDGNVQITNM PGGVGAVTYA MVDAERSDDA SLFVATSTVG VTQIAQGRYP SGIDTMRYLG
MLGADVGVIA VAADSEFESL AQLNEAIVAD PSSVVTAGSS GAGGWDHIRL LMVAREGGLE
DLPALRWVQF DGGTDAVTQM MGGQLDVVST DLGEIAGFVE SGDIRILAAL SSDPIPAFPE
IPTAISQGID VTGYNWRGLY TGGDVSDEDY NARVTQLETL YNSDEWQTAA VEFGLVPIWR
GGAEFEAYVR EQEQVMAEIS RDIGVIE