| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3669 |
|---|
| Symbol | |
|---|
| ID | 3936148 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 3745522 |
|---|
| End bp | 3747105 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637906046 |
|---|
| Product | transcriptional regulatory protein-like |
|---|
| Protein accession | YP_511611 |
|---|
| Protein GI | 89056160 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5616] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCTATG CGTTCGAAGA CTTCACGATC GACACGGATC GGTTCCAGCT CGCCCGTGGC
GACGAGCTGA TCGAGACTGA ACCGCAGACA CTCGAATTCC TGATTTTTCT GGCCCAGAAC
CAGGGGCAGA TGTTGACAAA AGACACGCTG CACGAGGTGT TCTGGCCTGA TCGAGTCGTG
TCGGACGCGG CGTTGTCGAC CTTGGTGCGC AATGCGCGGC GGGCGATTGG CGATTCCGGA
GAGCAGCAGC GCGTCATTGC AACCCGGCAC GGCCGTGGCT TCGTATTCCG CGCCGATGTC
CGTGAATTTA GCGATCCACA ACCTGCCGCC ATGCCCCGGT CTGTCGCCGC CGCGGCACCC
TCCCCACGGA TTGCAGGCGC ACCTGCCCTG ATGGTGTTGC CGTTTGAGAT CGTCGGCGAA
ACGCAGGACG CGGCCGGCCT CAGTGAAGGC GTGACGGAGG AAGTGATGGC CGCACTTTCC
AAATCGCGCT GGTTTCCGTT GATCGCCCGC AACCGGGTCC GGACATTTCA GGAGCTATCG
CCCGAAACGC GTCATCCTTT TGTGGGCTTC GGAGCCTCTT ACATCGTGGA AGGCGGCGTT
TTCAGGGACG GCGACGATAT TCGCGTGCAT CTGCAACTGA CGGACACGGA ACCAGCCCTG
CACATCCACC TGTCGCGACA TGACTTCAAA TACGAAGGGC TGTTCAAGCT CTTCGATGAG
ATCGCCACTG TCGTCGCCGC GACAGCGCAG CCGGAACTGA TCAAGGCCGA ACACCAAAAA
GCGGAGAAGA CCGATCCCGA AGCCCGCTCG GCGTGGCAGG AGTTTGTGCT TGGCCAATAC
CTGCTTGCCG CCCCGGACAA ACCGGCCAAC GCAGCCGCGC GGGCGCATTT TGAACGCGCG
ATGTCTCTGG AACCGGGGTC GGGACGCATC CATGCGGGCC TCGCGATGAC GCATCTTTGG
GATTACTGGT ATGATTGGTC ACAGAACGCC GGGATCTCCC TTGAAACCGC GGCGCGGGAC
GCGGAGCGTG CCCTGACCCT GGCGCCTGAT GACAGTTGGG CCTGGTCAAT TCTGGCGATC
TGCAAGCTGT CTTTGCGACG CTACGATGTG GCCTTGGCCG ACGCACAGCG CGCGATTGAT
GCCGACCCGG CGTCGGCAAT GGCCCATGGG TGCCATGCCT GGGTTCTTGC CTATGCAGGT
CGATATCGGG ATGCCTTGGC GGCCTATGAC CGCGCGGTGG CCCTTGGTGG CCCGAGTGAT
CCGCGCCGGG TGCTTTGGAT GACCGGGCGC GAAACGGCGC AATTCGGTCT TGGCGATTAT
GAAGGTGCAC TTGATACGGC GCGCGAATTG ATCGCCCTGA GCCCTGACAA TCCATCCGGC
TACCGCGTCA AATGTGCGGC CCTTGCCAGC CTCGGTCGAC TTGTTGAGGC CCGGCGCGCC
GCGGCGAAAC TGGTTGCTCT CTTGCCGGGC CACGATGTCG ACACAGCGAT TGCAAGGCAG
CCTTTTCAAC CAGAACTAGC ATCCGAGTAC GCCGCTGCGT TGAAGAAGGC GGGGCTCAAG
GGCGGCGCGG TTGCAATCGA GTAG
|
|---|
| Protein sequence | MIYAFEDFTI DTDRFQLARG DELIETEPQT LEFLIFLAQN QGQMLTKDTL HEVFWPDRVV
SDAALSTLVR NARRAIGDSG EQQRVIATRH GRGFVFRADV REFSDPQPAA MPRSVAAAAP
SPRIAGAPAL MVLPFEIVGE TQDAAGLSEG VTEEVMAALS KSRWFPLIAR NRVRTFQELS
PETRHPFVGF GASYIVEGGV FRDGDDIRVH LQLTDTEPAL HIHLSRHDFK YEGLFKLFDE
IATVVAATAQ PELIKAEHQK AEKTDPEARS AWQEFVLGQY LLAAPDKPAN AAARAHFERA
MSLEPGSGRI HAGLAMTHLW DYWYDWSQNA GISLETAARD AERALTLAPD DSWAWSILAI
CKLSLRRYDV ALADAQRAID ADPASAMAHG CHAWVLAYAG RYRDALAAYD RAVALGGPSD
PRRVLWMTGR ETAQFGLGDY EGALDTAREL IALSPDNPSG YRVKCAALAS LGRLVEARRA
AAKLVALLPG HDVDTAIARQ PFQPELASEY AAALKKAGLK GGAVAIE
|
|---|
| |