Gene Jann_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_3655 
Symbol 
ID3936133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3728201 
End bp3729463 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content60% 
IMG OID637906031 
ProductNa+/H+ antiporter NhaA 
Protein accessionYP_511597 
Protein GI89056146 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3004] Na+/H+ antiporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.287299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCGGG TCTGGAATTT CATTACCGGA TATTCACTGC TTTTGATCGG AGGCGCGATC 
ATCGCGTTGA TCTGGGCGAA TATCGATATC AACAGCTACC ATCATTTCAC GGAAGTCGTG
ATCTGGGCCG ACGCGCCTAT CGGGCACCTG CACGACGACG GCCATGGCCA TGTGGTTCGC
GACCTGACGC TCCATTACCT CGTGAACGAT CTGCTTATGG CCTTGTTCTT CGCCATCGCC
GCAAAGGAGG TTTGGGAGGC CGTGATCCTG AAGAACGGCT CCCTGCGCGG TAAGAAGGCG
GCAACGCCGT TGGTGGCCAC GTTGGGCGGC ATGGTCGGCC CAATCTCGAT CTATCTCGGC
ATCGCTTATT TCCTGGGCTC CACCACTTTC GATGCGGTGG CCAACGGATG GGCGATCCCC
ACGGCCACGG ATATTGCCTT CTCCTACCTT GTGGGACGTC TGGTGTTTGG CGCGGGCCAT
CCCGCCGTGC GGTTCCTGTT GCTGTTGGCC ATTGCCGACG ACGCTGCGGG CCTGCTGATC
CTGGCGATTT TCTACCCATC GGGCGAATTG GCCCCGGCCT GGCTGCTTCT GTCGTTCGGG
GCCGCTTTGG GCGTCTACGT GCTGGCCAAT TGGCTGCCGC GGCGCCTGGA TCGCGGTGAT
CAACTGCGCC GTCGGTCGTC CTGGATGCGA CAGAAACTGT CCTTCTGGCC CTATGCGCTG
GCCGGTTGCG CCAGTTGGTA CGGCTTCATG CAATCGGGCC TGCACCCGGC GCTTGGCCTT
TTGCCCATCG TGCTGACAAT CCCCCATGCG GACCGGGCTT TCGGCATCTT TTCCGCCGCA
GAAGTGCATT TGCATGACCT GCTCAACACA ATGGAACACG CGCTGAAATA CCCGGTAGAG
ATCATCCTGG GCCTCTTTGG CCTGATGAAC GCGGGCGTTG CGTTTTCGGC CATGGGAGAG
GCGACCTGGT TGGTTCTGGC GGGCCTTCTG ATCGGCAAGC CTGTGGGTAT TTTCCTGTTC
GGATGGCTGG CGGCGAAACC GCTTGGCTTG GGCCTGCCCC AAGGCATGCG AATGATTGAT
CTTGTGGTCA TTGGCTGCGT GGCTGCGATT GGCTTCACCG TCTCGCTCTT TGTGGCATCC
GTCGCGTTCG AGCCCGGGCC CGTTCAGGAT GCGGCCAAGA TGGGAGCGTT GTTCTCGTTC
GGAGCGGCGG CGGTCTCGAT CATTGTTGGC AAGCTGACAC AGGTGCAGAA GCAAGAGATC
TAG
 
Protein sequence
MYRVWNFITG YSLLLIGGAI IALIWANIDI NSYHHFTEVV IWADAPIGHL HDDGHGHVVR 
DLTLHYLVND LLMALFFAIA AKEVWEAVIL KNGSLRGKKA ATPLVATLGG MVGPISIYLG
IAYFLGSTTF DAVANGWAIP TATDIAFSYL VGRLVFGAGH PAVRFLLLLA IADDAAGLLI
LAIFYPSGEL APAWLLLSFG AALGVYVLAN WLPRRLDRGD QLRRRSSWMR QKLSFWPYAL
AGCASWYGFM QSGLHPALGL LPIVLTIPHA DRAFGIFSAA EVHLHDLLNT MEHALKYPVE
IILGLFGLMN AGVAFSAMGE ATWLVLAGLL IGKPVGIFLF GWLAAKPLGL GLPQGMRMID
LVVIGCVAAI GFTVSLFVAS VAFEPGPVQD AAKMGALFSF GAAAVSIIVG KLTQVQKQEI