| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3620 |
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| Symbol | |
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| ID | 3936098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3692221 |
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| End bp | 3693321 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905996 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_511562 |
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| Protein GI | 89056111 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.839815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.150585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACG GCGATCTGAA GACACTGGCC TTGGCCGATC TGCATAAGGA GCTTGGCGGC
AAATTCGTCG GCTTTGCGGG CTATTCCATG CCCGTCCAAT ACCCAACCGG CGTCATGGCC
GAGCATCTGT GGACACGCGA AAACGCCGGC CTGTTTGACG TCAGTCACAT GGGCCAAGTC
GTGCTGCCCG CCGATGCGGA TCTTGAGGCG CTGGTGCCGG TGGATGTGCT TGGCCTTGCA
GAGGGTCGCC AGCGATACGG TTTTTTCACA AATGACACGG GCGGTGTGCT CGACGATCTG
ATGATTGCAC GCGGTCCTGA TGGATTGTTC CTGGTTGTGA ATGCCGGGTG CAAAGCGGCC
GACATTGCCC ATCTACGCGC GCATATGAAC GGGGTGGAGG TGATCGAGGA CCGCGCCCTT
CTGGCCCTGC AAGGGCCCAA GGCAGATGCG GCGCTGGCCA AGCTGATCCC CGGTGCCGCC
GATATGCGCT TCATGGATTC CACGCGGATG GCGTGGGACG GGGCGGAGCT GTGGATCAGC
CGATCCGGCT ACACCAGCGA AGACGGGTTC GAGATATCGA TCCCGGATAA GCGGGCTGAG
GCCTTTGCGC GCGCGTTATT GGCGGACGAC CGTGTCCAGC CCATCGGTCT TGGGGCGCGG
GACTCGCTCC GTTTGGAAGC GGGCCTGCCG CTTTACGGCC AGGACATGAC ACCGTCCATC
AGCCCCGTCG AGGCCGGACA GGCCTGGGCC ATCGGCAAGG TCCGGCGCAC AGGCGGTGAC
CGTGCCGGCG GGTTCCCCGG TGCGGAGGTC TTGTTGGATC AACTGGCTAA TGGCGCGCCC
CGTCGCCGCG CGGGTCTTTT GCCAGAAGGT CGCGCGCCGA TGCGCGCAGG CGTGGAGATT
TTCGCGAGCC CGGACACACA GACACCCATC GGCGTTGTCA CGTCCGGCGG CTTTGGCCCA
ACCCTCGGCG CGCCCATGGC GTTGGCGCTG ATCGCCGCCG ACACGCCCAA AGACATCCCC
TTGTTTGGTG ACGTGCGCGG CAAACGCCTG CCCGTCGCAC AGACCAAACT TCCTTTCACA
CCCCCCGGCT ACAAACGCTG A
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| Protein sequence | MADGDLKTLA LADLHKELGG KFVGFAGYSM PVQYPTGVMA EHLWTRENAG LFDVSHMGQV
VLPADADLEA LVPVDVLGLA EGRQRYGFFT NDTGGVLDDL MIARGPDGLF LVVNAGCKAA
DIAHLRAHMN GVEVIEDRAL LALQGPKADA ALAKLIPGAA DMRFMDSTRM AWDGAELWIS
RSGYTSEDGF EISIPDKRAE AFARALLADD RVQPIGLGAR DSLRLEAGLP LYGQDMTPSI
SPVEAGQAWA IGKVRRTGGD RAGGFPGAEV LLDQLANGAP RRRAGLLPEG RAPMRAGVEI
FASPDTQTPI GVVTSGGFGP TLGAPMALAL IAADTPKDIP LFGDVRGKRL PVAQTKLPFT
PPGYKR
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