| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3176 |
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| Symbol | |
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| ID | 3935647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 3215810 |
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| End bp | 3216505 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905547 |
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| Product | thiamine pyrophosphokinase |
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| Protein accession | YP_511118 |
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| Protein GI | 89055667 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1564] Thiamine pyrophosphokinase |
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| TIGRFAM ID | [TIGR01378] thiamine pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTGA AATATAGTGA TTCCGTGGTT TTGGTCGGGG GCGGGCCGCT AAGCCCCGAT
ATCTTCGACG TCGTAAAATA CCGTGCTGGC TTTTTTGTGG CAGCCGACAG CGGTGCGGAC
GCATTACTGG CCAGAGAGGT GATTCCCGAC GCGGTGATCG GGGATATGGA TTCGCTGTCT
GAGCGCGCGC GCGCAGCGAT TCCGAAGGAT CGTCTCGTGG CCGTGTCCGA GCAGGATAGC
ACGGATTTCG ACAAGGCGGT TCGTGGAATT GATACACCAT TGATCTACGC GGTGGGGTTC
ACGGGCGGAC GATTGGACCA TGAATTGGCC GCGCTGCATG TCCTCGTGCG CTACGGCCAT
CGCGCCATCG TCCTTGTGGG GGAGGAGGAT GTGACGGTGC ACCTGCCCGC GCGCATCACA
CTTGATCTGC CCCGTGGAAT GCGCGTGTCG CTCTTTCCGC TGGATGCCGT CACGGTGGGG
ATGGAGGGGC TGCGTTGGTC GTTCAAGGCG CTGGCGCTGC ACCCGATACA CAAGATCGGG
ACGTCGAACG AAGTAGGTGA AGGTCCGGTC GTGCTGACCA GCGATGCGCC CGGCGCGCTG
TTGATCGTTC CGCGCTCGGC CTTAGATGCA GTGGTGGCGG GGCTGTCCCG CGCGGATTTG
CACTCGCCGC AGCCTGAACT GTCCGCTAAG ACGTGA
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| Protein sequence | MPLKYSDSVV LVGGGPLSPD IFDVVKYRAG FFVAADSGAD ALLAREVIPD AVIGDMDSLS
ERARAAIPKD RLVAVSEQDS TDFDKAVRGI DTPLIYAVGF TGGRLDHELA ALHVLVRYGH
RAIVLVGEED VTVHLPARIT LDLPRGMRVS LFPLDAVTVG MEGLRWSFKA LALHPIHKIG
TSNEVGEGPV VLTSDAPGAL LIVPRSALDA VVAGLSRADL HSPQPELSAK T
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