Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_3121 |
Symbol | |
ID | 3935592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 3162194 |
End bp | 3163801 |
Gene Length | 1608 bp |
Protein Length | 535 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637905492 |
Product | ferredoxin-dependent glutamate synthase |
Protein accession | YP_511063 |
Protein GI | 89055612 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism [R] General function prediction only |
COG ID | [COG0069] Glutamate synthase domain 2 [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0236823 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.274657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCAGA TCAAAGTTGC TGACCTCAAC ACCCTGAATG ACCGGGAGCC GGCATACGCG CTCGTGGCCG ATGTCGATCT CGTGGTGGTG CGCTGGGATG ACGAGGTGAG CGTGTTCTAC GGCCGTTGCC TGCACCGCGG CGCGTTGATG TCGGACGGGC ATGTTCGGGG AAAGAACCTG ATCTGCGGGG TTCATGACTG GGATTATCGT TTGGAGTCAG GCGTGTCTGA ATACGCCAAT GAGGAGGTGC TGCCCAAATT TGACTGCATA ATTGTGGGCG ATGACGTTCT GGTGGACGAG GACGAAATCG CCGCCTGGGG CCACGCGAAC CCCCAGCCGT TCAATCGGGA CGCATATCTG GGCCTTTATG CGGACACCTC CCATGGGACG GAGGAAGAGC CCTATGTCGG TACGATCCAA ACCTACGCCA AAGGCGGGTT GAAACACACC GGCCATCACG GGCAGGTCGA CGCGATGGGT GTCAGCCGCG CGAAACTGCC GGATTGGGAC GATATCCAGA TCCTCACGGC ACAGCTGCAC AAGGCCCCGA TGTTGGAGGA TGAGACCGTG GGCACCGACG TGGTGATCGG CCCCAACTCG CAGAAACCGT TGCGACTGGA GATCCCCCTG TTCGTCTCAG ACATGTCTTA TGGTGCGTTG TCGGAGCCTG CGAAGGTGGC TCTCGCGCAG GGGGCAGAAA TGGCCGGAAC CGGTATTTGT TCGGGCGAGG GCGGCATGTT GCCAGAGGAG CAGGCTGCAA ATTCTCGCTA CTTCTATGAG CTGGCCTCGG GTCGGTTCGG CTTCTCGTGG GAGAAACTCG CCCGCGTTCA GGCCTTCCAT TTCAAGGGCG GGCAGGGGGC CAAGACCGGG ACGGGCGGGC ACCTTCCCGG GCACAAGGTG ACAGGCAAGA TCGCCGAAGT GCGGGGGCTG GAGGAAGGAC AATCGGCAAT CTCTCCGCCC CGCTTCCCCG ACTGGACCGA CCCCGCCCAG ATCAAGGACT TTGCCGATGA AGTGCGGGAC CGGACGGGCG GCATCCCCAT CGGCTACAAG CTGTCTGCGC AGCATATTGA AAAGGACATC GACGCGGCGC TGGAGGTTGG GGTGGACTAC ATCATCCTTG ATGGTCGCGG CGGTGGCACG GGCGCTGCAC CGACGCTGTT CCGCGACAAT ATCAGCGTGC CGACGATCCC TGCGCTCGCC CGTGCGCGGC GGCATCTGGA CAAGACCCAG CCGGATGTGT CCTTGGTGAT CACTGGGGGC CTGCGCACCG CCCCCGATTT CATCAAGGCG CTGGCGATGG GCGCGGATGC AATTGCGGTT TCAAATTCGG CTATGCAGGC CATTGGATGT TTGGCGATGC GGGCCTGCCA TACCAACAAT TGCCCCGTGG GCATCGCGAG CCAAAAACCG CATCTTGTCA ATCGGTTGGT TGTTGAGAAA TCAGCGCGCC AATTGGCCAA CTTCTTTGAA GCCTCGACCG AGTTGATGCA GGTGATGGCG CGTGCGTGCG GCCATGATCA CCTGTCGAAA TTCAAATCGG ATGATCTGAC CACATGGAAA AAAGAGATGT CCGAGATTTC GGGCGTCGCA TTTGGAGGTG TCTCATGA
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Protein sequence | MPQIKVADLN TLNDREPAYA LVADVDLVVV RWDDEVSVFY GRCLHRGALM SDGHVRGKNL ICGVHDWDYR LESGVSEYAN EEVLPKFDCI IVGDDVLVDE DEIAAWGHAN PQPFNRDAYL GLYADTSHGT EEEPYVGTIQ TYAKGGLKHT GHHGQVDAMG VSRAKLPDWD DIQILTAQLH KAPMLEDETV GTDVVIGPNS QKPLRLEIPL FVSDMSYGAL SEPAKVALAQ GAEMAGTGIC SGEGGMLPEE QAANSRYFYE LASGRFGFSW EKLARVQAFH FKGGQGAKTG TGGHLPGHKV TGKIAEVRGL EEGQSAISPP RFPDWTDPAQ IKDFADEVRD RTGGIPIGYK LSAQHIEKDI DAALEVGVDY IILDGRGGGT GAAPTLFRDN ISVPTIPALA RARRHLDKTQ PDVSLVITGG LRTAPDFIKA LAMGADAIAV SNSAMQAIGC LAMRACHTNN CPVGIASQKP HLVNRLVVEK SARQLANFFE ASTELMQVMA RACGHDHLSK FKSDDLTTWK KEMSEISGVA FGGVS
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