Gene Jann_2999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2999 
Symbol 
ID3935469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp3018670 
End bp3020094 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content65% 
IMG OID637905369 
Producthypothetical protein 
Protein accessionYP_510941 
Protein GI89055490 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3540] Phosphodiesterase/alkaline phosphatase D 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.572214 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.496646 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGACC GCATCCTCGG GCCGCTTCTG ATCCTGGATC ATGTGGCCGA TGGTCAGATG 
CATGTTGCGG CGGTGTTCGT GGCCCCTCTG GGGCAAGACG TCCCTCCGGT CCGTGTGGAC
GGCACTGCCG TGCCTGTGCA GCCGCTTCTC GCCTTCGGCT CCGCGCAGCT GTGGCGGGCG
CGCTTCGCTT TGCCCGCCGA TGCGCCTTCG GCGTATGAGT GGGGCGAGCA GCGGTTCGAT
GTGGCGTCTG ATCTCAGCGG AGATTTGAGG ATCGCCTATG CGTCTTGCAA CGGAGAGGAG
CACGGCGACC TCACGCGCCT GGCCAAAGAG CGCAACATCA TGTGGGCGCG GCTGGCCAAA
GACCATCGCA ACGCGCCCTT TGGCCTTCTG CTTCTGGGCG GCGATCAGGT CTATGCCGAT
GAGGCGACGC GGGGCCATCC GCTCTCCGAT GAATGGCCCG AAAAGATCCC TCGCGATCCC
CTGCCCCACG ATCTGGACGA TCTGCGCGCC CACCTGCGAG AAGGGTTTCT GGAACGCTAT
GTGGCGCAGC TGCAAGACCC CGACTATGCG TGGCTGACCG CGCGCGTGCC AAGTCTGTCG
CAATGGGACG ACCACGACAT CTGTGATGGC TGGGGCTCTC TGCCTCGGTC GCGCACCTAT
TCGCCGGTTG GGCAGGTCTT GTTTGACGTC GCCAAAGAGG CCGCTCTGGC GTTTCAGCAC
GGAACCGTGG CAGGCGATCT GCCCGCGCGG TTTGCGGATC CGGACGGCTA TCACCTCAAC
TGGGCCGTCC AGATGCCCGG CCTGCGCCTG CTTGGTCCCG ATCTGCGGTC CGAGCGGACG
CGGCGACAGG TCATGGACGT TGGTGGATGG GCTGATGTCG AGGCCCATGC CGAAGCGCCG
TTCCAGGGCC GCACTTTCGT GATGTCCTCC GTCCCGCTCC TCGGGCCGCG GCTGTCGATT
CTGGAGACGC TGATGGTGGT CACACCCCGG ATGCAGAAAT ACGAGGACGA CCTGCGCGAT
CAATGGCAAA GCCGCGCCCA CCGCGACAGT TGGCGGCGGA TGCTGCGCCT GATGATGCAG
ATGCAGGAGC AAGAGGGGCA GGACGTCGCG ATCTTGTCGG GCGAAATTCA CCTCGCCACA
CTCGCCACAA TGGCGGCCCG CAACGGGCAA ATGCTGCACC AGCTGGTGGC CTCTGCCGTG
ACGCACAGAC CACCCCCGAA AGCCTGGGCG CGGTTCCTGG GGACACTGTC GCGATTGGGC
GAGGCACCGC TGCCCGGCCA CCGCATTCGC ATCCGCCGCA TCCCGGGCCA ATCCCTGCGC
TATGTCGCAG ATCGCAACGT TCTGGTTTTG GAACGTCGCG GTGGCGCATG GCAGGCCGTC
TGGCATTTTG AGCAGACAGG CGCATCCCCG CCCCTGGCCC TCTGA
 
Protein sequence
MVDRILGPLL ILDHVADGQM HVAAVFVAPL GQDVPPVRVD GTAVPVQPLL AFGSAQLWRA 
RFALPADAPS AYEWGEQRFD VASDLSGDLR IAYASCNGEE HGDLTRLAKE RNIMWARLAK
DHRNAPFGLL LLGGDQVYAD EATRGHPLSD EWPEKIPRDP LPHDLDDLRA HLREGFLERY
VAQLQDPDYA WLTARVPSLS QWDDHDICDG WGSLPRSRTY SPVGQVLFDV AKEAALAFQH
GTVAGDLPAR FADPDGYHLN WAVQMPGLRL LGPDLRSERT RRQVMDVGGW ADVEAHAEAP
FQGRTFVMSS VPLLGPRLSI LETLMVVTPR MQKYEDDLRD QWQSRAHRDS WRRMLRLMMQ
MQEQEGQDVA ILSGEIHLAT LATMAARNGQ MLHQLVASAV THRPPPKAWA RFLGTLSRLG
EAPLPGHRIR IRRIPGQSLR YVADRNVLVL ERRGGAWQAV WHFEQTGASP PLAL