Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2956 |
Symbol | |
ID | 3935426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2977292 |
End bp | 2978203 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637905326 |
Product | oxidoreductase-like |
Protein accession | YP_510898 |
Protein GI | 89055447 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0116698 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCAGC GTCTGGCAGC CCATGGGCAG TTCGACCTCG CAGGCATCTT CGCGCCCGAA GTGGATGGCT ATGGGACGTT TGAGGCGATC TGCGATGATC CCTCCGTCGA CGCCGTCATC CTCACCAGCC CCAATGACCT GCACGAGGCG CAATCTGTCG CTGCGGCCCT GGCCGGCAAA CATGTGTTCT GCGAAAAGCC GCTGTCTCTG ACTGGCGCCA GCGCGCGGCG GATCGTGGGC GCCGCGCAGG ATGCTGGCGT CGTTCTGGGC ATCGGCCATG AACGTCGGTT CGAGCCGGCA ATGCAAGAGG TCGCGACCAT GGTGCGCGAC GGTGCATTTG GCACGGTGAT GCACGTCGAA GCCGCGTTCA GCCATGACAA GCTGGCGGGC CTGCCGAAGG ACAATTGGCG CACCCGGCCC GCCCTTGCAC CCGCGGCGGG GATGACCGGC ATGGGCATCC ATCTGACAGA CTTCATGATC TGGATGTTCG GCCCGGTGGC CCAGGTTCAG GCAGTAACAG CGGATCGGTC GCTGGGGTGG GAAACGGGGG ATGTTGTCTC GGTCCAGTTG GTGTTTGAGG CGGGAATGAC CGCCACCCTC TCGGCGATTC TGCACACGCC GCATTTCATT CGTTACCACG TCTTTGGCTC CGACATCTGG GCAGAGGTGC GCAACGACAC GCATCCCGAC ACACCGGGAG GGCAGGCGCA TCTTGTCATC TCAAAAGGCG GTGGTCACAC CACGGAGAGT TTCCCATGGA CTGACGCTGT CGTGGACAAT CTGACAGCGT TCGCCAATGC GATTGAGGGC ACCGCCCCGT ACCCGTTCAC ACCGCATCAG ATGATTCACA ATATAGAGGT TCTGGAAGCC ATCGCGACCT CGGCTGCGAC GGGTGGGACG GTCCGCCTAT AG
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Protein sequence | MAQRLAAHGQ FDLAGIFAPE VDGYGTFEAI CDDPSVDAVI LTSPNDLHEA QSVAAALAGK HVFCEKPLSL TGASARRIVG AAQDAGVVLG IGHERRFEPA MQEVATMVRD GAFGTVMHVE AAFSHDKLAG LPKDNWRTRP ALAPAAGMTG MGIHLTDFMI WMFGPVAQVQ AVTADRSLGW ETGDVVSVQL VFEAGMTATL SAILHTPHFI RYHVFGSDIW AEVRNDTHPD TPGGQAHLVI SKGGGHTTES FPWTDAVVDN LTAFANAIEG TAPYPFTPHQ MIHNIEVLEA IATSAATGGT VRL
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