Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2915 |
Symbol | |
ID | 3935384 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2937629 |
End bp | 2938297 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637905285 |
Product | GntR family transcriptional regulator |
Protein accession | YP_510857 |
Protein GI | 89055406 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.18394 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAGGA GGCCCGACGT GACGACCCAA ACCAACACCG TTATCGACCT GATCCTCTCT CGGATCGACG CAGGCACCTT GCTGCCCGGG CAGACCGTTG ACGAGAAGGA CATGATGGCC GAATGCGGCG TCTCGCGTAC CCCGGTTCGC GAGGCGTTGA TCCGGCTGGA GGTTGATGGT CTGGTCCAGC GTCATGCCCG CAAGGGGGCG GTGATTTTTC AGCCGAACGT CCAGGAATTC CTCACCATTC TGGAAGTTCA CGCAAACCTG GAGAGCTTCG CCGCAAGCCT CGCCGGGCAA CGGATCACGG ACGCCGTCGC CACAGAGTTG CGTGCAATTG TTGTGGCGTG CCGCGATCAC GCAAAGGCCC ATGGCCACAG CGATCCGTCG GGATATTACC AGCTTAACCT TCAGTTCCAC GAGATCATTG TGCGCGCTGC CCGCAACGAC GTGTTGGCGC AGATGGTCAA GACCAATGCA CGCAAGCTGA TGGCCTATTA TCGGATGCGA TATCGCACGC CCGGCGCAGC CGTGGCCTCC GCCGAGGATC ACGCGCTGAT CGCGGATCAC ATTCTTGGGC GCCGTGCGGC GGAGGCGCAG GCGGCCATGC TGGATCACTT CAATTACGAC CGCCAAACGG TCATGGACCT GATCGCGTCA GTCGGCTGA
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Protein sequence | MARRPDVTTQ TNTVIDLILS RIDAGTLLPG QTVDEKDMMA ECGVSRTPVR EALIRLEVDG LVQRHARKGA VIFQPNVQEF LTILEVHANL ESFAASLAGQ RITDAVATEL RAIVVACRDH AKAHGHSDPS GYYQLNLQFH EIIVRAARND VLAQMVKTNA RKLMAYYRMR YRTPGAAVAS AEDHALIADH ILGRRAAEAQ AAMLDHFNYD RQTVMDLIAS VG
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