| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2768 |
|---|
| Symbol | |
|---|
| ID | 3935232 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2784625 |
|---|
| End bp | 2784984 |
|---|
| Gene Length | 360 bp |
|---|
| Protein Length | 119 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637905133 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510710 |
|---|
| Protein GI | 89055259 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5462] Predicted secreted (periplasmic) protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.36439 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCTTCA TCACGTTGAT CGCCATTATC ATCGTTGTGG CCTTGGGCAA CTGGGCCTAC
CATCAGACAA TCCAAACCCA GATGACGGAC CGTGACGTCA ACCGTTTGCA GCGCGAAATC
GTCAATGAAC GCGAGCGTTT GGGGATATTG CGCGCGGAAT GGGCTTATCT CAATCGACCC
GACCGCCTCC GCGAATTGGC CGACTTCAAC TTTGATCGCC TGGGCCTTTT GCCGCTGGCG
CCAAACCAAT TTGGGGATGT GGCTCAGATC CCGTTCCCGT CGCCGATTGA TGCCGCAGAA
GACTTCATCC TTGAAAACTC CTCCAACCCG CTTTGGGACG GAGAGATAGA GCCGCTATGA
|
|---|
| Protein sequence | MRFITLIAII IVVALGNWAY HQTIQTQMTD RDVNRLQREI VNERERLGIL RAEWAYLNRP
DRLRELADFN FDRLGLLPLA PNQFGDVAQI PFPSPIDAAE DFILENSSNP LWDGEIEPL
|
|---|
| |