Gene Jann_2656 details

Gene Information

• Locus tag: Jann_2656
• ID: 3935120
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Jannaschia sp. CCS1
• Kingdom: Bacteria
• Replicon accession: NC_007802
• Strand: +
• Start bp: 2668107
• End bp: 2668646
• Gene Length: 540 bp
• Protein Length: 179 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637905021
• Product: TetR family transcriptional regulator
• Protein accession: YP_510598
• Protein GI: 89055147

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.754114
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0141418
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACAAATC GCCTCACCCC CGATGATTGG ATCGCCGCAG GCTTTCGCGC TCTGTCCGAA 
AGCGGACCAG AAGCCTTGAA GGCCGAGGCC CTGGCCCGGC GTTTGCAGAC AACCAAGGGC 
AGTTTTTATT GGCACTTCAA GGACGTGCCC ACGTTTCAGT CCGCGATGCT CGACCTTTGG 
CAGGACAAGG CCTTCTCCGC CATCGTGGCC GAGCTTGAGG GTATACCCGC GCCAATCGAT 
AAGCTGCGTC AACTGGCTAC GATTGCCAAC GATGGTGCCC CGGATCGGTT TGGCGGTTTG 
CTGATCGAGC CCGCGATACG CGCCTGGTCG CTGAGGGACG CGCGGGCGGC GGCTGCTGTC 
GAGACTATCG ACACAGCGAG GATCGCGTAC CTGGCCAACC TGATGCAAGC CATTGGCAAA 
CCGCGATCTC TTGCGATGCT GTTTTATGGT GCCTTTGTCG GGCTCGATGA TCTGCAAGCG 
CGGGGACGTC CTGATACGGC GGGCGCGCTG AGTGATCTGG TGGAGAGGAT CATCGCCTGA 

 

Protein sequence

MTNRLTPDDW IAAGFRALSE SGPEALKAEA LARRLQTTKG SFYWHFKDVP TFQSAMLDLW 
QDKAFSAIVA ELEGIPAPID KLRQLATIAN DGAPDRFGGL LIEPAIRAWS LRDARAAAAV 
ETIDTARIAY LANLMQAIGK PRSLAMLFYG AFVGLDDLQA RGRPDTAGAL SDLVERIIA