Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2408 |
Symbol | |
ID | 3934865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2409682 |
End bp | 2410566 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904766 |
Product | LysR family transcriptional regulator |
Protein accession | YP_510350 |
Protein GI | 89054899 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0423159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.525947 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGCACC CAGCCCCCGA GATCGCAGCT TTCGTGCGCG TTGTGGAGCT TGGATCCTTT GCATCGGTGG CGTCCGATAC CGGGTACACA TCCTCCGGCG TCTCCCGCAT GGTCACACGG TTGGAGGAAA ATTTTGGCAC CAAGTTGTTT TTCAGATCAA CGCGGCAGCT GTCCCTGACC CCTGACGGAG AGGCGTTCCT GCCACGGGCA CGGTCCATTC TGGACGCGAT CGAGGCGGCC GGTGCCGACT TATCGGATGC AGCAGAGACC CCGCGCGGAC ATATCCGTCT GAACTGCGGC ACGGCCTTCG CCAATCACAA GCTGGCGCCA CGTCTCGCGG ACTTCGCAAC GCGTTATCCG CATATCTCGC TTAGCATTTC GGTCACCGAC CAACGGGTCG ATCCGGTCGC GCGGCAAGCG GACGTGACGA TCCGGGTTGG CGATCTGGCA GATAGCACCC TCATCGCCAT CCCCTTGGGT TCGGTCGCGC GCGTCATCGC CGCGAGCCCC GCTTATCTGG CGAAGCATGG AGAGCCCCAG ATAGCACGGC ACCTTCTGAA ACATAATTGC CTGTTGTTGA ACGGGTTTCC ACATCAGGCC GCCTGGCCCT TTCTGGAAAA GGGTCAGCCG ATCACGGTAT CTGTCAAAGG GACCCTGACA TCCGACAGCG CCGAGACGCT TCTGCACGCC GCTATATCCG GCGCGGGCAT CATTCGACTG GGCGATTTTC TGGGGGCCGA TGCGCTGGCG TCGGGTCAGC TGGTTCCGAT CCTGACCAGG ACACATGATC CTGTCCGGCA ACCCATAACG GCGCTGGTGC CGCCCGGTCG ACACTCCGTT CCGAGGGTGC GGGCGCTTTT GAACTTCCTC AAAGCGAACG TCTGA
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Protein sequence | MPHPAPEIAA FVRVVELGSF ASVASDTGYT SSGVSRMVTR LEENFGTKLF FRSTRQLSLT PDGEAFLPRA RSILDAIEAA GADLSDAAET PRGHIRLNCG TAFANHKLAP RLADFATRYP HISLSISVTD QRVDPVARQA DVTIRVGDLA DSTLIAIPLG SVARVIAASP AYLAKHGEPQ IARHLLKHNC LLLNGFPHQA AWPFLEKGQP ITVSVKGTLT SDSAETLLHA AISGAGIIRL GDFLGADALA SGQLVPILTR THDPVRQPIT ALVPPGRHSV PRVRALLNFL KANV
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