Gene Jann_2397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2397 
Symbol 
ID3934854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2398267 
End bp2399478 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content65% 
IMG OID637904755 
Producthypothetical protein 
Protein accessionYP_510339 
Protein GI89054888 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.69184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGG TGTCCCGCAG ACATGTCCTT TATATCCCCG GCTTTGACCC GGTGCCCCCG 
CGCGCCTACC GGGAGCGGTA CCGGCGGGAG GCTTTGAAGC AAGCGGAGAT GTCAGGCTTC
GAGATTGCCC AGGGCCCGGC GGCGGAAGAC AGGCGGTTTG GCTGGCGTGT TGACGCTATG
ATGGACGGGG CGTCCGTGCG CGCGGATATG GAGATTCTTT ACTGGGCCGA CATCGTGCGC
GATGGCATGG CGTCGGGCGT TGCGCGGACC TATGGGCAAC TGGCGCGCAC GGCGTGGATC
TACATCGGCT CGGGCGCGCT GTTTCGGCTG ATGCGGTTGC GCAAGGGACC GGTGATTGCG
GCTCTTTATC CGGTCGCGGT CCTCCTCGGG CAAGCCCTCC TCGCAGGGAT GCTGGCCTAT
GCGGTCTTTG CTTTGGGGCG GGTGGTTTTA GGGGCCGGGT GGCTGTCGGT GTTGGGGGCG
CTGGCGGGGG GCGGTGCGGC GGCGATGTTG CTGCGGTGGT GCGCGCGCAG GGATCATCTT
TTGGCCTGGT ATCTGATGAA GGACTACGCC TTTGCGGCGC GTCTGCGCGG TGCCTATCCG
CCGGAGCAGG AGGTCCGCAT GGCGGACTTC GCCGACCGGA TCGCCGAGGC GCTGCAAGGC
GATGTGGATG AGGTGCTTGT CGTCGGCCAT TCCTCTGGCG CGTATATGGC CGTGTCGGTT
CTGGCGGATT TGATCCGGGC GGGGCGACGG CCCAAAGATG GCCCGGTTCT GTCGCTTCTC
ACCCTTGGCC AGGTGGTGCC GATGGTCAGC TTCCTGCCAG AGGCCACGCG GTTGCGAGCG
GATCTGGCGG TCCTGTCGGT GCAAGAGCTG GCCTGGGTCG ATGTCACGGC CCCCGGCGAC
GGTTGTTCCT TCGCACTGTG TGACCCCGTG GCCGTGTCCG GTGTTGCACC TGCTGACAAA
ACCGGTCCCC TGGTGATCTC TGCGGCCTTC ACGCAAACGC TGTCCGCTGC GCGGCAAAAG
GCCCTGAAGT GGCGGTTGTT CGAGTTGCAT TTTCAGTATC TGAACGCCTT TGACGCGCTC
CCAGATCGCC CGGACGCCTA TGATTACTTT CGCGTCACCG CAGGGCCGAT GACTTTGGGC
GACCGTTTTG CCACCCGCGC ACCGTCCAAA AGCCGGATTG AGACGCCGGT CAGCGGGTTT
ACCGACATAT GA
 
Protein sequence
MTQVSRRHVL YIPGFDPVPP RAYRERYRRE ALKQAEMSGF EIAQGPAAED RRFGWRVDAM 
MDGASVRADM EILYWADIVR DGMASGVART YGQLARTAWI YIGSGALFRL MRLRKGPVIA
ALYPVAVLLG QALLAGMLAY AVFALGRVVL GAGWLSVLGA LAGGGAAAML LRWCARRDHL
LAWYLMKDYA FAARLRGAYP PEQEVRMADF ADRIAEALQG DVDEVLVVGH SSGAYMAVSV
LADLIRAGRR PKDGPVLSLL TLGQVVPMVS FLPEATRLRA DLAVLSVQEL AWVDVTAPGD
GCSFALCDPV AVSGVAPADK TGPLVISAAF TQTLSAARQK ALKWRLFELH FQYLNAFDAL
PDRPDAYDYF RVTAGPMTLG DRFATRAPSK SRIETPVSGF TDI