Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2122 |
Symbol | |
ID | 3934575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2131349 |
End bp | 2132245 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637904478 |
Product | periplasmic binding protein |
Protein accession | YP_510064 |
Protein GI | 89054613 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.10692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.278949 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGT CAATTCTTGC AACCGTCGTC ACATTGGCCC TGTCTGGGAC AGCTTTCGCC GACACGATCA CCCACGCCAT GGGCGAGACG GACGTGCCCG AGGCGCCCCA GCGGATCGTC ATGCTGACCA ATGAGGGGAC GGAAGCGTTG CTGTCGCTTG GTCTGACCCC TGTCGGCGCA GCCAACAGCT GGACCGGCGA TCCGTGGTAC ACCCATATCA CGCCGCAGAT GGACGGCGTG GAACCGCTCG GCAACGAGAC AGGCATCAAC CTGGAACTCG TCGCCGCACT TGAGCCGGAC CTGATCCTCG GCAACATGCA GCGCCATGAA GAGATCTACA CCCAACTCAG CGCCATTGCG CCCACTGTGA TGTCGGAACG CCTGCGCGGC GATTGGCGCG TCAATTATGC ACTTTATGCA GAGGCCGTGG GCATGGCCGA TGAAGGCGCC CAGATCCTCG CGGATTACGA CGCGCGGGTC GCCGAGTTGT CTGAGGCTTT GGGCGACAAC CTGTCTGAGG AGGTTTCGGT GATCCGCTTT CTCGCCGCGC ACATCCGTAT CTACCAACTC GACAGTTTCT CTGGCGTGAT CCTCAGCAAC CTCGGCTTTG CCCGGCCCGC GATCCAGGAC GTGGAAGACT TCGCCATGCG CGTTGGCCGT GAAAGCATCC CAGATATGGA CGGGGACCGG ATCTTCCACT TCACCTACGA TAACGGCAAC GGAGAAGGCG AAGCCGCCGC TGAGCAGGCG CTGGTCGATC CCCTTTGGCA GGGTCTGGCC GCCGTGCAGG AAGGCCGCGT CCATTCCGTC AGCGATGAGG CTTGGAACAC CGCAGGCGGT ATTCTTGCGG CGCGCCTGAT GCTCGATGAC ATTGCACGCA TCTATGGCGT CGAATAG
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Protein sequence | MRLSILATVV TLALSGTAFA DTITHAMGET DVPEAPQRIV MLTNEGTEAL LSLGLTPVGA ANSWTGDPWY THITPQMDGV EPLGNETGIN LELVAALEPD LILGNMQRHE EIYTQLSAIA PTVMSERLRG DWRVNYALYA EAVGMADEGA QILADYDARV AELSEALGDN LSEEVSVIRF LAAHIRIYQL DSFSGVILSN LGFARPAIQD VEDFAMRVGR ESIPDMDGDR IFHFTYDNGN GEGEAAAEQA LVDPLWQGLA AVQEGRVHSV SDEAWNTAGG ILAARLMLDD IARIYGVE
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