| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2108 |
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| Symbol | |
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| ID | 3934561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2116526 |
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| End bp | 2117497 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904464 |
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| Product | xylose isomerase-like |
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| Protein accession | YP_510050 |
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| Protein GI | 89054599 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.546252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.693114 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC CAAATCGCCC CCGCTATGCC GCGCGGCTCA ACGCGTTCAA ACAGCTCACG
CCGGGCTCGG ATGTGCGGGA CTGGATCGCG GCGGCGGGAC AGGTGGGCGG ATTGGGGGCG
GCGGACCTGA ACTTCCCAGA CCATTTTGCG GTCTATGACG CGGACCAGAT GGGGAATTTT
CTGGGGGAGG CCGCGCTGAC TTTGAACGGG ATCGCGATGC GGTACTATAC CGACCCCGGT
TTCAAACTGG GCGCGTTCAC GCATCCTGAT GCCGCTGTCA GACAGGCCGC CTTGGATGTC
ACCAAACAGG GTATCGACAC CTGTGCCCGC ATGGGCGGCA AAACGGTCAC TTTGTGGATG
GGGCAGGACG GGTTCGATTA TGCGTTTCAG ATGGATTACG GGCTGGCCTG GGATCGCACG
GTCGCGGCCA TCGCCGATAT CTGCGCCCAT GACCCAAACA TCGACATCGC GATTGAATAC
AAACCGAATG AGCCGCGGGC CTTTGCCCTG ATGCCGGATA TCGGCACCAC GTTGCTGGCC
TGCCGCGAGG TGGGCGCGGT CAATCTGGGC GTGACGCTCG ACTTCGCCCA TGTCCTTTAC
GCCGATGAGA TGCCCGCCCA TTCCGCCGCG CTGATCGGGC GGCATTCGCG GATGATCGGC
CTGCATCTGA ACGACGGCTA CGGCAAGCGC GACGATGGGC TGATGGTGGG CTCGGTCCAT
GCCATCCAGA CCGTCGAATT GCTGGTCGCG ATGCTGCGGA TGGGCCAGAC CGATGTGATC
TATTTCGACA CCTTCCCCGA CATGGGCGGT CTGAACCCGA TTGAGGAGGC GCGGACCAAT
GTCGCCGTCA CGGATCGGCT TATGGCGGTT GCGGAAAGTC TGATGGAAGA TCCAGCGCTG
GCGCAGGCGA TTGACCGGCA GGATGCGGCG GCATCACACC GGATCGTCGC GCGGGCCTTG
TACGGCTCAT GA
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| Protein sequence | MSRPNRPRYA ARLNAFKQLT PGSDVRDWIA AAGQVGGLGA ADLNFPDHFA VYDADQMGNF
LGEAALTLNG IAMRYYTDPG FKLGAFTHPD AAVRQAALDV TKQGIDTCAR MGGKTVTLWM
GQDGFDYAFQ MDYGLAWDRT VAAIADICAH DPNIDIAIEY KPNEPRAFAL MPDIGTTLLA
CREVGAVNLG VTLDFAHVLY ADEMPAHSAA LIGRHSRMIG LHLNDGYGKR DDGLMVGSVH
AIQTVELLVA MLRMGQTDVI YFDTFPDMGG LNPIEEARTN VAVTDRLMAV AESLMEDPAL
AQAIDRQDAA ASHRIVARAL YGS
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