| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2050 |
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| Symbol | |
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| ID | 3934503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2054779 |
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| End bp | 2055633 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904406 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_509992 |
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| Protein GI | 89054541 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.192935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTAC CCCAGAAGAT GTTCAAAATT GATACCTACC TCAGCCCCGG CGAGGCGTTT
CATTTTGTGC GCAAGGAGCT ATCGGAAGCC TCACCCGTGT TGGAGCATGA CCACGATTAC
TATGAGCTGT TCCTGATCCA GCAGGGTCAG GTCTATCATT GGATCAACGG GCTAGAAGAG
ATGTTGGAGC CCGGCCACAT GGTGTTTGTT CGCCCGTCCG ACCGTCACGC CCTGCAAGGG
GCACCGGGCA CCGGCGCGAA AATCCTGAAC GTGATGTTCC GAACCCAGAC CGCGGCGCAT
CTGGTGACGC GGTACGCGGA TGTGTTCGGG GGGCGGTTCT TCTGGCAACC GGGGCCCCTG
CCCGTGACGT TGCGCCTCCA CGGCCCGCAG CGGGAACGCG CGATCAACTC CATGTTGACG
CTCGACACCA GCTTCCGAAA CCTGGCGCGG ATCGAGCTGT TCCTGCTGTC GGTCATGACC
CATGTGCTGG ATACCGGCGA GATCGTCGAT GGTCGCGCCC CGGGCTGGTT GTTGCAGGCG
TGCCACGCGG CCCGTGAGCC GCGCGTGTTT CGCCAGGGCG CGGATGGGTT CTTGCACGCC
GCCGGCCGCT CGCAAGCCCA TGTGTGCCGA CAAGCGCGCC GATACCTCGG CCTGTCGCCA
ACGCAATATG TCAATCGCAT CCGCATCCAG CACGCGGCCA TGCTCTTGGC GGGAACGGAA
CGTGGCCTGC CGGACATCGC TGCCGATTGT GGGTTTGAAA ACCTGAGCTA CTTTCACCGT
CTGTTTCGCG AGCAATATGG CACAACGCCC CGCGGCTACC GCCACCGTCA TGTGCGTCCG
ATCGCACCGC TTTAG
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| Protein sequence | MRLPQKMFKI DTYLSPGEAF HFVRKELSEA SPVLEHDHDY YELFLIQQGQ VYHWINGLEE
MLEPGHMVFV RPSDRHALQG APGTGAKILN VMFRTQTAAH LVTRYADVFG GRFFWQPGPL
PVTLRLHGPQ RERAINSMLT LDTSFRNLAR IELFLLSVMT HVLDTGEIVD GRAPGWLLQA
CHAAREPRVF RQGADGFLHA AGRSQAHVCR QARRYLGLSP TQYVNRIRIQ HAAMLLAGTE
RGLPDIAADC GFENLSYFHR LFREQYGTTP RGYRHRHVRP IAPL
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