| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_1964 |
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| Symbol | |
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| ID | 3934415 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 1957806 |
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| End bp | 1958483 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637904318 |
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| Product | HhH-GPD |
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| Protein accession | YP_509906 |
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| Protein GI | 89054455 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0340706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.441447 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGTGTCA CGTTTTGTGG CGGCGCACGG CGGATGTGGC CCTGGACCGA GACCTGGAAC
CGCAAGATGC GCATAGAGAC CGATGAAGAT GTGGCGGAGG GCTTTGATCG CCTCCGAAAG
ATCGAGCCGA AGTTTGCAGT GATTTCAGGG CCTTTGCCGC TGCGGCGCAG GCCGGACGGG
TTCGGCGCGC TCTTGCATGC GATTGTGGGC CAGCAGGTGT CTACGGCGTC AGCGGCGGCG
ATCTGGGGGC GGGTTCAGTC CGCCGGCCTG CATCAGGAGA CGGCGGTGGC CGCAGCGACT
GAGGAGGCGT TGCGCGGCTG CGGCTTGTCG CGACCCAAGG TGCGTTATGC CAAAGCGCTG
TCGGAGGCGC GGATCGACTA CGCAGCCCTG CGGGACGCGC CCTTGGACGA CGTGCTGGCC
ACGTTGATCG CGGTGCCGGG CATCGGGCGC TGGACGGCGG AAATCTACGC CAAGTTTGCG
CTGGGTCACG CGGATGTCTT TGCCGCCGGG GATCTGGCCT TGCAGGAGGG GGCCAGGCTG
CTGTTCGATC TGCCCGAGCG ACCTGCCGAG AAAGAGATGC GCGCCATGGC CGAGGCCTGG
ACGCCGGTCA GGGCCATTGC CGCCCGCGCG CTCTGGGCCT ACTACCGGGA AAAGACCAAA
CGGGAGGGCG CGATATGA
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| Protein sequence | MGVTFCGGAR RMWPWTETWN RKMRIETDED VAEGFDRLRK IEPKFAVISG PLPLRRRPDG
FGALLHAIVG QQVSTASAAA IWGRVQSAGL HQETAVAAAT EEALRGCGLS RPKVRYAKAL
SEARIDYAAL RDAPLDDVLA TLIAVPGIGR WTAEIYAKFA LGHADVFAAG DLALQEGARL
LFDLPERPAE KEMRAMAEAW TPVRAIAARA LWAYYREKTK REGAI
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