Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_1939 |
Symbol | |
ID | 3934390 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 1929585 |
End bp | 1930670 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637904293 |
Product | oxidoreductase-like |
Protein accession | YP_509881 |
Protein GI | 89054430 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.116604 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.625753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAGAT ACGGCCTGAT CGGGGCGGGA ATGATGGGCC AGGAGCACAT CCGCAACATC GCCCTTTTGC CGGACACGGC CGTGACAGCG ATTTATGAGC CCGATGACGC CATGGCCGCG TTGAGCCTTG CGTTGACCGA CGGCGCCACG CGCTATGACA GCCTGAGCGC GCTGTTGACG GGCGCAGAGA TCGACGCGCT GGTGATCGCC TCGCCCAACC ACTGCCATGT CGCGCAATTG CAGCAGATCG CGGCCAAAGT GTCCCTGCCG ATCCTGTGCG AAAAGCCGCT GTTCACCGCG CCGGACGATG CCGATGCGGT GGCCGCGCTG GACGCCTACA CAGCCCCGAT CTGGGTCGCG ATGGAATACC GCTACATGCC GCCCATCGCG ACCTTCCGCG AGATGGTGGA GGCGGCCACG GGGGGCATCA AGATGCTGAC GATCCGCGAG CACCGCTTTC CGTTCCTGGA GAAGGTCGGC GACTGGAACC GCTTCAACCG CAATTCCGGC GGCACGCTGG TGGAGAAATG TTGTCATTTC TTTGACCTCA TGCGCTTGAT CTTAAAAGAC GAACCGGTAC GGGTCATGGC GAGCGCCGGG CAATCGGTGA ACCATCTGGA CGAGCGCTAT GGCGGAGAGA CGCCGGACAT CTGGGACAAT GGCTACGTCA TCGTCGACTT CAAAGGCGGC GCGCGGGCGA TGCTGGAGCT GTGCATGTTC GCCGAAGGCA GCGAGTATCA GGAAGAGATC AGCGCCGTGG GGCCCAAGGG CAAGATTGAG GCCCGCGTGC CCGGCCCCAC CCGGTTCTGG AACACCGCCC TTGGCCCCGC GCCGATGCCC AAAGTCGTCG TCAGCCCCCG CGCGCCGACG ACCGGACAGG TGGTGCATGA TACGCCGGTG GACAAGGATC TGTTGACCGC AGGCGATCAC CACGGATCGA CCTATTACCA GCATGTGCAG TTTCTGGACG TGGTCCGTAA CGGCGCCCGC CCCGCCGTCA CACTCCGCGA TGGGGCGGCG GCGGTGCGCA TGGGCATGGC CGCACAAGAC AGCGCGCGGA CGGGTCGGGC TGTGGATCTG GCGTAA
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Protein sequence | MTRYGLIGAG MMGQEHIRNI ALLPDTAVTA IYEPDDAMAA LSLALTDGAT RYDSLSALLT GAEIDALVIA SPNHCHVAQL QQIAAKVSLP ILCEKPLFTA PDDADAVAAL DAYTAPIWVA MEYRYMPPIA TFREMVEAAT GGIKMLTIRE HRFPFLEKVG DWNRFNRNSG GTLVEKCCHF FDLMRLILKD EPVRVMASAG QSVNHLDERY GGETPDIWDN GYVIVDFKGG ARAMLELCMF AEGSEYQEEI SAVGPKGKIE ARVPGPTRFW NTALGPAPMP KVVVSPRAPT TGQVVHDTPV DKDLLTAGDH HGSTYYQHVQ FLDVVRNGAR PAVTLRDGAA AVRMGMAAQD SARTGRAVDL A
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